Vollenhovia emeryi: 105569543
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Entry
105569543 CDS
T06016
Name
(RefSeq) splicing factor 1
KO
K13095
splicing factor 1
Organism
vem
Vollenhovia emeryi
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vem03041
]
105569543
Spliceosome [BR:
vem03041
]
Complex A
Other components
Complex A specific factors
105569543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
TFIIA
AP3D1
zf-CCHC_5
Trp_oprn_chp
BAF1_ABF1
TSA
Motif
Other DBs
NCBI-GeneID:
105569543
NCBI-ProteinID:
XP_011881487
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MNQPRNFTSLLNPSYLQNAQQQQQQQQQQQQQQQQQQNAVSANPAVVAAAAAAAAAAVSA
AIANGTQSNANTASAVTASRKREMDGDGKQDKESKDGERKKRKKTRWSGSEHDKTFIPGM
PTVLPTNLTPDQEKAYLFQLQIEEISRKLRTGDLGIPLNPEERSPSPEPIYSSDGKRLNT
REYRTRRKLEEERHNLIQKILKINPEFKPPPDYKPPIIRVHDKVMIPQEEHPDINFVGLL
IGPRGNTLKSMEKETGAKIIIRGKGSVKEGKVGRKDGQPLPGEDEPLHAYITANNLDAVK
KAVERIHEIIRQGVEVPEGQNDLRRNQLRELALLNGTLRENDGPRCTNCGASDHKSWLCP
DKPNVTNNIVCSSCGGAGHIARDCRSKRPGQGGPAAAGMGGMGQAGDKAKIDEEYMSLMA
ELGEGPPPDRSKTGQNRQTPNPNYPGLFDRQQPPRALMAAPAHPPPQMMQGGPMMPPPGM
APPPWSQGGEGMNNMNMQWQPPVSMPPPPGVMQPPPPPPGSTTQPNIPPLMPWMAGNNQP
PPPGQMPPTQIPPPGMGIPPWQQGQQGPMRPPPPGTAPPPGFPGGWQPQQMGGWPPAAPV
PPPPQQQTPAPPGIDLNTLPTLLAQPPPPPPPTS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccaaggaatttcacgtcattgttgaatcctagctacttgcagaatgcacag
caacagcagcaacagcagcagcagcaacagcagcagcagcagcagcagcagaatgccgtg
agcgcgaacccagcggtggtggcggcggcggccgctgctgccgccgccgcggtgagtgcc
gcgatagcaaacggcacgcagtcgaacgcaaacacggcgagcgctgtaacggcgagccgc
aagcgggaaatggatggcgatggtaaacaggataaagaatcgaaagatggagaacgtaag
aagaggaaaaagactagatggagtggtagcgaacatgacaaaacatttataccagggatg
cctacagtactaccgacaaatcttactcctgatcaggagaaggcttatctttttcagctg
cagattgaggaaatcagcaggaagctacgcactggagaccttggaattccacttaaccct
gaggaaagatccccatctccagagcctatttacagtagcgatggcaaacggttgaacacg
agagagtatcgtacaagacgtaaattagaggaggaacgtcataatctgattcagaagatc
ctcaagatcaatccagagttcaaaccaccaccggattacaagccaccaataatacgagtt
cacgataaagtaatgattcctcaggaagagcatcctgatataaattttgttggtttactt
attggaccacgtggaaatactctaaaatctatggaaaaggaaactggcgcaaagattata
attcgtggaaagggctctgtaaaggaaggaaaagttggcaggaaagatggtcagccttta
ccgggagaggatgaacctttacacgcatacattaccgcaaacaatttagatgccgtgaag
aaagctgtggaacgaattcatgaaattattcggcaaggggtggaagtgccggagggtcaa
aatgacttacgtcgcaatcaattacgcgagttggctttattgaacggaacattacgtgag
aatgatggacctcgttgtaccaattgtggagcttcggatcacaagtcttggctgtgtccc
gataaaccaaatgtgaccaacaacatagtatgttcaagttgtggtggtgcagggcatatc
gcccgagattgtagatcaaagagacccggtcaaggaggtccagcagcggccggaatgggg
ggaatgggtcaagctggggacaaggccaagatagatgaggaatacatgtcgctcatggca
gaattgggggaaggcccaccaccggacagatcgaaaacaggacaaaacagacagactccc
aatcccaattatcccggactatttgatagacaacaaccacctcgagcgttaatggcagct
ccggcgcatccaccgccgcaaatgatgcagggcggtccgatgatgccgccgccgggcatg
gcgccaccgccgtggagccaaggaggcgaagggatgaacaacatgaacatgcaatggcag
ccgccagtgagcatgccgccgccaccgggagtgatgcagccgccgccacctccacccggc
tccactacgcagcccaacattccgccattaatgccgtggatggccggtaacaaccaacca
ccgccaccgggtcaaatgccgcctacgcagattcctccgcccggcatgggcataccgccg
tggcaacaaggtcagcagggaccgatgcggccacctccgccgggcacggcgccgccgcca
ggcttccccggtggttggcagccacaacagatgggtggctggccaccggctgctccggtc
ccgcctccgcctcaacaacagactcctgcaccacctgggatcgacctgaacacgctgccg
acgttactcgcgcaaccaccaccgccacctccgcccaccagttag
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