KEGG   Vollenhovia emeryi: 105569596
Entry
105569596         CDS       T06016                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
vem  Vollenhovia emeryi
Pathway
vem03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vem00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105569596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vem03019]
    105569596
   03036 Chromosome and associated proteins [BR:vem03036]
    105569596
Messenger RNA biogenesis [BR:vem03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     105569596
Chromosome and associated proteins [BR:vem03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     105569596
    COMPASS/SET1 complex (yeast)
     105569596
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_VPS8 DSE1_N Beta-prop_NOL10_N Beta-prop_WDR75_1st PAC11 CFAP251_N Beta-prop_SPT8 WD40_RFWD3 Beta-prop_WDR35_TULP_N WD_LRWD1 Beta-prop_WDR19_1st Tricorn_2nd Beta-prop_WDR41 Beta-prop_Nup120_160 TRM82_WD Beta-prop_NUP159_NUP214 MIOS_WD40 Beta-prop_Vps41 PROPPIN Arylsulfotran_2 WD40_like MinC_C
Other DBs
NCBI-GeneID: 105569596
NCBI-ProteinID: XP_011881575
LinkDB
Position
Unknown
AA seq 315 aa
MKLVDHVVRSFKVAKVFRENTDRINSIDFSPNGDTLISCSEDDQIVIYDCEKGTQVRTVN
SKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVSLCISPIED
TFLSGSLDKSLRLWDLRSPNCHGVMNVSGRPVAAYDPEGLIFAAGVNSENIKLYDLRSFD
KGPFVTFKLSQEKECDWTGLKFSRDGKTILISTNGSTIRLIDAFHGTPLQTFAGYLNNKG
IAIEASFSPDSQFVFSGSTDGRVHVWNAETGYKVCVLNGDHPAPVQCIQFNPKYMMLASA
CTNMAFWLPTIDENA
NT seq 948 nt   +upstreamnt  +downstreamnt
atgaagctcgtcgaccatgtggtgaggagcttcaaggtggccaaggtattccgcgagaac
accgatcggataaacagcatcgacttctcgccgaacggcgacacgctcatctcctgctcg
gaggacgatcagatcgtcatatacgactgcgagaagggcacgcaggtgcggacggtcaac
tcgaagaagtacggcgtcgacctgatacacttcacccacgccaagaacaccgcgatacac
agcagcaccaaggtcgacgacaccatccgctatctcagtctgcatgacaacaagtacata
cgctattttcctggtcacacgaaaaaggtagtgtcgctatgtatcagtcctatcgaggat
actttcctgtccggttccttagataaatccctgagactgtgggacctgcgctcgcccaat
tgccacggggtgatgaacgtctcgggacgtccggtcgcggcatacgatcccgaaggtctc
atcttcgccgccggtgtcaattccgagaacatcaagttatacgatctccgcagctttgac
aaggggccgttcgtcaccttcaagctctcccaggagaaagagtgcgattggaccggattg
aagttcagtagggacggcaaaaccatcttgatctctactaatggtagtacgattcgttta
attgacgcttttcatggtacgcccttacagactttcgccggatatctcaacaacaagggg
atcgccatagaggccagttttagtccggattcccagtttgtgttcagtggctccacggat
ggtagagtgcacgtgtggaatgcagagaccggttacaaagtttgcgtgttgaacggtgac
catccagcaccggtgcagtgtattcaattcaatcccaagtacatgatgttggcatctgcg
tgcaccaacatggccttctggctacccactatcgatgaaaacgcataa

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