KEGG   Vollenhovia emeryi: 105570184
Entry
105570184         CDS       T06016                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
vem  Vollenhovia emeryi
Pathway
vem03030  DNA replication
vem03410  Base excision repair
vem03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105570184
   03410 Base excision repair
    105570184
   03420 Nucleotide excision repair
    105570184
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vem03032]
    105570184
   03400 DNA repair and recombination proteins [BR:vem03400]
    105570184
Enzymes [BR:vem01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     105570184
DNA replication proteins [BR:vem03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    105570184
DNA repair and recombination proteins [BR:vem03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      105570184
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N
Other DBs
NCBI-GeneID: 105570184
NCBI-ProteinID: XP_011882583
LinkDB
Position
Unknown
AA seq 2241 aa
METLQNTGAARPPRAFNKRNPTQETGAPGENALGRLLEIKEDIRIDGVYGFRRVTDARER
IGFLLNMHATEIVEDDKRLLSGVDYYFIEEDATRFKVSLPYSPYFYVLCRKDTFEEVSTF
LSKKYAGTLTKIETVYKEDLDLPNHLIGLRQKYLKVSFANIVDLTKVKRDIVRVVRINKE
REKGKTYYTDMLATTLQPNEQDSGRQTLDHMDNILDIREHDVPHHVRVSIDANIFCGVWY
SVKSRGSEPPVITRKEDMIEPPEPIVLAYDIETTKLPLKFPDASFDQIMMISYMIDGQGY
LITNRELISADIRDFEYTPKPEFEGPFTIFNEPNEKAAIAKFFNHINEIRPHIFVTYNGD
FFDWPFVEARAAVHNMDMKENIGFSKNREGVYVSRAAMHMDCLCWVRRDSYLPVGSQNLK
AVAKAKLRYDPVELDPEEMCRLASEEPEVLANYSVSDAVATYYLYQKYIHPFIFALCTII
PMEPDEVLRKGSGTLCESLLMVQAFQANIIFPNKQETELNKLTKDGHLLDQETYVGGHVE
ALESGVFRADIPCRFKIVPSAVDELISGVESALKHTIQEEEKVPIDMVTNFDEIVNEVKG
KLKELKDQPLRLENPVIYHLDVGAMYPNIILTNRLQPSAIVNEMDCAVCDYNKPDALCQR
KMQWMWRGEYLAASLGEYQRIKQQLETERFPPQFPGGTKRAFHELPLKEQATFQKNRLTE
YCKKAYKKVKITRMEERTQTICQKENSFYVDTVRAFRDRRYEYKALTKVAKRQVAAAVAK
GDAADIKSAKNREILYDSLQLAHKCILNSFYGYVMRKGARWHSMEMGGIVCYTGAHIIMK
AREIIERIGRPLELDTDGIWCILPASFPDSIVVHTTHEKKSKFTISYPNAVLNFMVKDQF
TNEVYHDLVDQDNLTYEVRSENSIFFEVDGPYLAMVLPAAKEEGKKLKKRYAVFNFDGSL
AELKGFEVKRRGELQLIKIFQASVFESFLKGNTLEECYASVAKDADYWLDLLYSKCANMP
DSELFELISENKSMSRKLEEYGAQKSTSISTAKRLAEFLGDEMVKDAGLACRYIIASKPQ
SAPVTERAIPLAIFQSEPAVRRHYLKKWLKDPTLYSDDIRDILDWNYYIERLGSAIQKII
TIPAAMQGLPNPVPRVQHPPWLHKKVTEKNTSHRQKKITDIFSVVVNDTSRASGAEESRD
IEDLAGPSTSFKTPMSVVNKRKRQQSDEDETIRARSWKEALGSPPPRGTTKEEKFKWLEF
HKKKWAFQAKQRQQHRQKRSKTDENDRVAWGVIRNTNTSTMTGFLRRAQRKLLETPWEIV
QLSETGEPGMFRLWILVDTQLHQVRLVVPRIFYVNTRKARPDPGPNELWKKSFKSLPRSR
PVYNLYRYSLPESLFQEHSRELLEDLSKPEIEGIYETQMSLEFRAVLQLGCVCIVDPRAA
RKMADGADTFTLDQLEFKSIAFQPYLKRTDSINYIFLYHHWSANRQRALWGLFLSASKRA
HVFVLDSVASNQLPNMSMLYAQERKATLEKNGEDKIDRLPKTMQFVVQVETSFQQVCRTL
QAALTTYKNEGHGATIVINQAALDRTVLTTEMPLLNEFPLVSTHVRDVENLYGTLEWQKT
GAKMMVRHYLKSQQIVELIAEQCRFFHAPIGNVPADPTLFGADLFYARHLHRNNFVLWCS
STEKPDLGGSENDDNRLLTDFEESASCAANNPGTYSSVCVQLDVESLAVNALLQYHHIHD
IDGTSTFVAFHNQQRPSVQDMAMGGDAATIIPSYDEITLCNPAFKTLRSMVNAWLLEVSA
YKNVFADYQLIHFYRWLRTSSALLYDPALRRTLHTYMKKLYIQLIAEFKTLGCIIVFANF
NKIIVCTKKRSVNDALGYMEFVVQTIRNKELFHSIEITYDQCWEYLIWLDLHNHAGIRGQ
LSRDDTEDENTESDDDTPQIMMNWSLMEILPQEAGCQASFNAVTAGYINAVYQCMIENEA
NTTVRPRRRHSQSQSFIAPLGLGALENTAEFAKKLISGEMSQRLFKIAQKIHRNLPEKAL
TLEEYPNLDMGGKESIRINPALELIKAVCKVLSLDKEVEHEVYNLKANLLRLIGVGSYGD
NVEWNEPCITLVLPEVICKACNHTRDIDLCKDQCYSNENNRHMWKCPICDTFYDNTEIEF
LLIDKLNRKSMGYVLQDLQCRKCKEIKRDNMNILCSCSGEYDNLISRDEVTTYVNICKSI
ATKCKMSILAEIVDNTKLFTG
NT seq 6726 nt   +upstreamnt  +downstreamnt
atggagaccttgcagaacaccggggctgcccggccgcccagggcgttcaacaagaggaat
ccgacgcaagagaccggcgcgccgggggaaaatgccttgggaaggttgctcgagatcaag
gaggacatcaggatcgacggcgtgtacgggttccgtcgagtcaccgacgcgagggagagg
ataggatttctgctcaacatgcacgcgacggagatcgtggaggacgacaagcgtctgctg
agcggcgtggattattacttcatcgaggaggacgccaccagatttaaagtgtcactgccg
tactcgccgtacttctacgttttgtgccgcaaggacacgtttgaggaggtgtcgacgttt
ctgtccaagaagtacgcgggtactttgacgaaaatcgagaccgtttacaaggaggatctc
gacctgcctaatcacttgattggactgagacaaaaatacctgaaggtttccttcgccaac
attgtcgacttgacgaaagtcaagcgcgacattgtgcgcgttgttagaattaacaaagag
cgagagaagggcaaaacttactacacggacatgctagcgactaccttgcagccgaacgaa
caggacagcggtagacaaactttagatcacatggataatattcttgatattagggaacat
gatgtacctcatcatgtgcgagtatccatagacgctaacatcttctgtggagtctggtac
tctgtaaagagcaggggaagcgaaccacctgtaatcacgcgaaaggaagacatgatcgaa
ccacctgagcctattgtgttggcgtacgatattgaaactacgaagctgccgttgaagttt
ccagacgccagtttcgatcaaatcatgatgatatcgtatatgatagatgggcagggatac
ttgataacaaatagagaattaatctctgcggacatacgagatttcgagtatacgccaaaa
ccagaattcgaaggtcctttcacgatattcaacgagcctaacgagaaagcagctatagcg
aaatttttcaaccacattaatgaaataaggccgcatatatttgtaacgtacaacggcgat
ttcttcgactggccgtttgttgaagctcgagcagctgtacataatatggacatgaaggag
aacattggtttctctaaaaaccgtgagggtgtctacgtcagtagagctgctatgcacatg
gattgcttatgttgggtaagacgtgactcttatctgccggtgggttctcaaaacttgaaa
gccgtcgctaaagccaagttgagatatgatccagtggaacttgatccggaagagatgtgc
agattagcatcggaggaacctgaagtgctcgcgaattattccgtctctgatgccgtggca
acatattatctctatcagaaatacattcatcccttcatattcgcattgtgcactattatt
cctatggaacccgatgaagtactcagaaagggatctggtacactgtgtgaatcacttctt
atggttcaagccttccaagctaatattatatttcctaacaagcaagaaaccgaattaaat
aaattaacaaaggacggtcacttactggaccaagagacctatgtgggtggacacgtggag
gctttggaatctggtgttttcagagctgacattccttgccgttttaaaattgtcccgagc
gccgtggacgagttaatcagtggtgtagaaagtgccttgaaacacacgatacaagaagag
gagaaagtaccgatcgatatggttacgaattttgacgaaatagtgaatgaagttaaggga
aaattaaaggagcttaaagatcagcctttgagattagaaaatcctgtaatttatcacttg
gacgtaggcgccatgtatcctaatataattttgactaatagattgcaaccttccgcgata
gtaaatgagatggactgcgcggtatgtgattataacaagcctgacgctctttgtcaaaga
aagatgcaatggatgtggagaggcgaatatttggctgcaagtttgggcgaatatcagaga
ataaagcaacaattagaaactgagaggtttccaccacaatttcctggtggtactaagaga
gctttccacgaattgcccttgaaagagcaagccacatttcaaaagaacaggcttaccgag
tattgcaaaaaggcgtacaagaaggtcaaaattaccagaatggaagagagaacccagacg
atttgtcagaaggagaattcgttttacgtagacactgtaagagcatttagggacagaagg
tacgaatacaaagcgttgactaaagttgctaagcggcaagtagcagcggcagttgcgaaa
ggagatgcggctgatatcaaatctgccaagaatagagaaattttgtacgattctcttcag
cttgctcacaaatgtattctcaattctttttatggctacgttatgaggaagggggcgcga
tggcacagcatggaaatgggtggcatcgtatgttacacaggagcccacattatcatgaaa
gctagagaaattatagaacggattggccgtccattggaattggatactgacggtatatgg
tgcatattacccgcgtcttttccagactctattgtagttcacactactcatgaaaagaag
tcgaaatttacgatctcgtacccgaatgcggttctcaatttcatggtgaaggatcaattt
accaacgaggtataccatgatcttgtggatcaggataatttaacgtacgaagtcagaagt
gaaaattcgatatttttcgaagttgacggaccgtatctggcgatggttttacccgctgcc
aaagaggagggaaagaaattgaagaaacgatacgcggtttttaatttcgacggctcactg
gccgagcttaagggatttgaagtaaaaaggaggggcgaattgcagctgataaaaatcttc
caagcctccgttttcgaatccttcctaaaaggaaacacgttagaggaatgttacgcctcg
gtcgcgaaggacgcggattattggctggatttattgtacagcaagtgcgcgaacatgccc
gactccgaattgttcgagctcatatctgagaacaaatctatgtcacgtaaattggaagaa
tacggcgcgcagaagtccacgtccatctccacggctaagagattggccgaatttttgggc
gacgagatggttaaggacgcaggcctggcttgtagatacattatagcgagtaagccgcag
agcgcgccggtcaccgagcgcgcgataccgttggccatctttcagtcggaaccggcggtg
cggagacactacttgaaaaagtggttgaaggatcccactttgtacagcgatgacataaga
gatattttggactggaattattacatcgagcgactcgggagcgccattcaaaagatcatc
actataccagcggcgatgcaaggcctgccgaatccagtcccgcgagtgcagcatccacct
tggttgcacaagaaagtgacagagaagaatacgtcccatcgtcagaaaaagatcacagac
atattttctgttgtggtcaacgacacgtcacgtgcaagcggcgccgaggagtcccgcgat
attgaggatctcgcaggaccgtccactagcttcaagacgccaatgtcggttgtcaacaag
aggaaaaggcagcagtcagatgaggatgagacaatcagagccaggagctggaaagaagct
ttgggctcgccacctcccagaggaacgacgaaagaagagaagttcaaatggctggagttt
cacaagaaaaagtgggctttccaggccaagcagaggcagcagcatcggcagaagaggagc
aagaccgacgaaaatgatagagtcgcctggggagttatacgaaatacgaatacgtctacc
atgactggctttttgaggcgcgctcagaggaaattgctcgagaccccgtgggagatcgtt
cagctgtcggaaacgggtgaacccggtatgtttcgattgtggatactggtcgacacgcag
ttgcatcaagtacgtctcgtggtgccccgtatattttacgtcaacacccgcaaggcgagg
cccgatccaggacctaacgagctctggaagaagagcttcaaatctctaccgcgctctcgc
ccggtgtacaacttgtatcgatattctctgccagagtctctgttccaagagcacagccgg
gaactcctggaggacttgagtaaaccggagatcgaggggatctacgagacgcaaatgtct
ttggaatttcgagccgtgctgcagttgggatgcgtgtgcatagtggatccgcgtgccgcg
cggaagatggcggacggggccgacacgttcacgctggatcagttggaattcaagagcatc
gcctttcagccctacctcaagcgtaccgactcgatcaactacatattcctctatcatcat
tggagcgcgaaccgccaaagagcactgtggggcttgttcctaagcgccagcaagagagct
cacgtattcgtcttggactcggtcgcttccaatcaactgccgaatatgagcatgctgtac
gcgcaggagcgtaaagcaacgctggaaaagaacggcgaggacaagatagacaggttgccc
aaaacgatgcagttcgtggtgcaagttgaaacgagcttccagcaggtgtgccggacgttg
caggcagccctgacgacgtacaagaacgagggccacggcgcgacgattgtcattaatcaa
gccgctctcgacaggacagtgttgactaccgagatgccgcttctcaatgagtttcctctc
gtcagtacgcacgtgcgagacgtcgagaatctgtacggcacgttagagtggcagaagacg
ggcgcgaaaatgatggtccggcactacctgaagagtcagcagatcgtcgaattgatcgcg
gagcagtgccgattcttccacgctcctatcggcaacgtgcccgcggatcccacgctcttc
ggcgcggacttgttctacgcccggcacttacacaggaacaacttcgtcctgtggtgctcg
tccacggagaagcccgacttgggcggcagcgagaacgacgacaacaggctgctgacggac
ttcgaggagagcgcgagctgcgccgcgaacaatcccggcacgtattccagcgtttgcgta
caattggacgtggagagtctggcggttaacgcattgctgcaataccatcatatccacgat
atagacgggaccagcacgtttgtggcctttcacaatcaacagcgtccgtccgttcaggac
atggcaatgggtggcgatgccgcgacgatcattcccagctacgatgaaatcaccctgtgc
aatccggcgtttaagacgctgcgaagcatggtgaacgcgtggctgctcgaggtatccgct
tataaaaacgtattcgcggactatcagctgatccacttctatcggtggctgagaacctca
agtgccttgctttacgatcctgccctacgccgcactctgcacacctacatgaagaagctg
tatatacaattaatagcagagttcaaaacgctaggctgcattatagtctttgcgaacttc
aacaagattatcgtgtgcacgaagaagagatctgtgaacgacgccttaggctatatggag
tttgtcgttcaaaccatacggaacaaagagctgtttcacagtattgaaattacttatgat
caatgttgggaatatctaatatggcttgacctgcacaatcacgctggcattagaggacag
ctatccagggacgatacggaagatgagaatactgaaagtgacgatgacacgcctcaaata
atgatgaattggagtttgatggaaatcctgcctcaggaagcagggtgtcaagcgagtttc
aacgctgtaacagcgggatatataaacgcggtgtaccagtgtatgattgagaacgaagcc
aacaccaccgtaaggccgaggagaagacacagccagagtcaatcgtttatagccccactt
ggtctaggtgcattggaaaatacagccgagttcgcgaaaaaattgatatcgggagaaatg
tctcagagattgttcaaaatagcccaaaagatacatcggaatttaccggaaaaggcatta
actctcgaggaataccctaatttggatatgggtggaaaagaaagtataaggatcaatcct
gcacttgagttaatcaaagcagtgtgcaaggttttatctttggataaggaagtggaacac
gaggtttataacttaaaggcaaatttgttaagattgatcggagtcggtagctacggcgac
aatgtcgagtggaatgaaccgtgtatcactctcgtgttaccagaagttatatgtaaagca
tgcaatcacacgagagacattgatctctgtaaagatcagtgttactcaaatgaaaataac
aggcacatgtggaaatgtcccatctgtgacacgttttacgacaacacggagatagaattt
ctattgattgacaaattgaatcgcaaaagtatgggctacgtgttgcaagatctacagtgt
cgaaagtgcaaagagatcaaacgagacaacatgaatatattgtgttcctgctcaggcgaa
tacgacaatttaatctcgcgagacgaagttacaacatatgtaaatatatgcaaatctata
gccaccaagtgtaaaatgagtattttagcggagatagtggacaacacgaagctcttcacg
ggctag

DBGET integrated database retrieval system