Verrucosispora sp. NA02020: HUT12_00005
Help
Entry
HUT12_00005 CDS
T06958
Symbol
gyrA
Name
(GenBank) intein-containing DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ver
Verrucosispora sp. NA02020
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ver03032
]
HUT12_00005 (gyrA)
03400 DNA repair and recombination proteins [BR:
ver03400
]
HUT12_00005 (gyrA)
Enzymes [BR:
ver01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HUT12_00005 (gyrA)
DNA replication proteins [BR:
ver03032
]
Prokaryotic type
DNA Topoisomerases
HUT12_00005 (gyrA)
DNA repair and recombination proteins [BR:
ver03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUT12_00005 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAGLIDADG_3
Intein_splicing
TPD52
Motif
Other DBs
NCBI-ProteinID:
QKW11323
UniProt:
A0A7H8K3X8
LinkDB
All DBs
Position
115..3894
Genome browser
AA seq
1259 aa
AA seq
DB search
MTDSPESTPNEPEVPEAPAAVVAHDRIEPVGLEVEMQRSYLDYAMSVIVGRALPDVRDGL
KPVHRKILYAMFDSGYRPDRGYVKCSRVVGDVMGQFHPHGDSAIYDALVRMAQPWSLRYP
LVDGNGNFGSPGNDPAAAMRYCLTADVRIRAASGSVRIGDVVPGAASSSESDIDLKVRDR
NGDLVRASAFFHSGEHPTLRLRTREGYELTGTHNHPVLCLVDVAGVPTLLWKLLAEISQG
DRVVLQRSVPDEIGYPMLEHVEAAVLAGAFVSEGWVSETRAGFNNVDREFFVRVLAAYDL
AVGGRRYVSERVIASGSVLHELDIQDLSALRASVLGEMVGARSADKFVPEFVWQGPAAIK
RAFLQALFEGDGSSSLLPRNTIQISYSTRSERLAREVQQLLLEFGVVSRQCRYDNGEIKV
VVTNRRDARIFAAQVGFLGRKQAKLESELASVPASSTALSSDHVPLVGDFIREHGASRWT
ERDWLRRHNVDRIERWERDRDEIAARITESEVLDVVEPLVDGRFYYAEVAGVTDAGVQPV
YSIRVDTDDHSFVSDGFVSHNTECKLDPLAMEMLRDIDEDTVDLQDNYDGRAKEPTILPS
RIPNLLINGSEGIAVGMATKIPPHNLREIGAAVQWCLENPEADEATTLEALLEIVKGPDF
PTHGLIVGQSAIQDAYRTGRGSIRMRAVVEVEEDKRGRPALVVSELPYQVNPDNLAERIA
ELIKEGKLGGIADIRDESSGRTGMRIVLVLKRDAVAKVVLNNLYKHTQLQETFGANMLAL
VDGVPRTLNLAQFIRYYVEHQIEVIRRRTAFRLRKAEERAHILRGLSKALDALDEVIALI
RRSPTVEDARQGLIRLLEIDEIQATAILDMQLRRLAALERQRILDDLAKLELEIADLKDI
LAKPERQRRIVSEELGEIVAKWGDDRRTQIIPFDGEVSMEDLIAREDVVVTITRTGYAKR
TKVDLYRSQRRGGKGVSGATLRQDDIVSHFFVCSTHDWMLFFTNKGRVYRAKAYELPEAS
RVAKGQHVANLLAFQPDEQIAQIIEIPNYQVAPYLVLATKNGLVKKTRLEEFDSNRSGGI
IAINLRDEDELVGAALVDPGEDLLLVSKNAQAIRFNATDDALRPMGRATSGVIGMRFSDE
DELLAMEVVREGLDVLVATNGGYAKRTPIEEYPVQGRGGKGVLTAKITERRGGLVGAVVI
DPDDELFAITSNGGVIRTPVKPVRRTRDRNTMGVKLMDLPDGVTIVAIARNADEPDEQD
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgattcccccgagtccacaccgaacgagcccgaggtccccgaggcgccggctgcc
gtggtcgcccacgaccgcatcgagccggtcgggctcgaggtggagatgcagcgctcctac
ctcgactacgcgatgagcgtcatcgtcgggcgggcgctgccggacgtccgggacgggctc
aagccggtccaccgcaagatcctctacgccatgttcgactcgggctaccgaccggaccgt
ggttacgtcaagtgttcgcgcgtcgtcggcgacgtgatgggccagttccacccgcacggg
gactcggccatctacgacgccctggtccggatggcccagccctggtcgctgcgctacccg
ctggtggacggcaacggcaacttcggttcgcccggaaacgaccctgctgcggctatgcgt
tattgtctgaccgcagatgtccgtattcgtgccgccagtggcagcgtgcggatcggtgac
gtggtgccgggcgcggcgtcgagcagcgagagcgacatcgacctcaaggttcgcgaccgc
aacggcgacctggtccgcgcctcggcgttcttccactccggcgagcacccgacgctacgg
ctgcgcacccgcgaggggtacgagctgaccggcacccacaaccacccggtgctctgcctg
gtggacgtggccggcgtgccgaccctgctctggaagctgctcgccgagatctcgcaaggc
gaccgggtggtccttcagcgcagtgtgccggacgagatcggctacccgatgctggagcac
gtcgaggccgccgtcctcgcgggtgccttcgtcagcgagggctgggtctccgagacccgc
gcgggcttcaacaacgtcgaccgcgagttcttcgtccgcgtcctggcggcgtacgacctc
gctgtcggcggtcgtcggtacgtcagcgagcgggtgatcgcgtccgggagcgtcctgcac
gaactcgacatccaggacctttccgcgctccgggccagcgtcctcggtgagatggtcggt
gcgcgcagcgccgacaagttcgtgccggagttcgtctggcaggggccagcggcaatcaag
cgggccttcctccaggcgctgttcgagggcgacggttcctcgtcgctgctgccgcgcaac
accatccagatctcgtactccacgcgcagcgagcggctcgcccgcgaggtgcagcagttg
ctgctggagttcggcgtcgtcagccgccagtgccggtacgacaatggcgagatcaaggtc
gtggtgaccaaccgccgggacgcgcggatcttcgccgcccaggtcggcttcctcggccgc
aagcaggccaagctggagtcggagttggcctcggtcccggcgagcagcacggcgctctcc
agcgaccacgtgccgctggtcggtgacttcatccgggagcacggcgccagccgctggacc
gagcgggactggctgcgccggcacaacgtggaccggatcgagcgctgggagcgcgatcgc
gacgagatcgccgcccggatcaccgagtccgaggtgctcgacgtggtcgagccgttggtg
gacggtcgcttctactacgccgaggtggccggggtcaccgacgcgggtgtgcagccggtc
tacagcatccgggtggacaccgacgaccactcgttcgtctccgacgggttcgtcagccac
aacaccgagtgcaagctcgacccgctcgccatggagatgctgcgggacatcgacgaggac
accgtcgacctccaggacaactacgacggccgggccaaggagcccaccatcctgccgtcg
cggatcccgaacctgctgatcaacggctccgagggcatcgcggtcggcatggccacgaag
atcccgccgcacaacctgcgggagatcggtgcggcggtgcagtggtgcctggagaacccg
gaggcggacgaggccaccacgctggaagcgctgctggagatcgtcaagggtccggacttc
cccacccacggtctgatcgtcggccagtccgccatccaggacgcgtaccgcaccggtcgg
ggctcgatccggatgcgcgcggtggtcgaggtcgaggaggacaagcgcggtcggccggcg
ctggtggtcagcgagctgccgtaccaggtgaacccggacaacctggccgagcggatcgcc
gagctgatcaaggagggcaagctcggcgggatcgccgacatccgggacgagtcctccggg
cgtaccggtatgcggatcgtgctggtgctcaagcgcgacgcggtcgcgaaggtggtgctg
aacaacctctacaagcacacccagcttcaggagaccttcggcgcgaacatgctggcgctg
gtcgacggggtgccgcgcacgctgaacctggcgcagttcatccgctactacgtcgagcac
cagatcgaggtgatccggcgacggacggcattccggctgcgcaaggccgaggagcgggcg
cacatcctgcggggtctctccaaggcgctggacgccctggacgaggtgatcgccctgatc
cggcgttcgcccacggtcgaggacgcccggcagggcctgatccggctgctggagatcgac
gagatccaggcgaccgcgatcctggacatgcagctgcgccgcctcgccgcgctggagcgg
cagcggatcctcgatgacctggccaagctggaactggagatcgccgacctcaaggacatc
ctggccaagccggagcggcagcggcggatcgtctcggaggagctgggcgagatcgtcgcg
aagtggggcgacgaccggcgtacccagatcatccccttcgacggcgaggtctcgatggag
gacctcatcgcccgcgaggacgtggtggtcaccatcacccgcaccgggtacgccaagcgg
acgaaggtggatctctaccgctcgcagcggcgcggcggcaagggtgtcagcggtgccacg
ttgcggcaggacgacatcgtcagccacttcttcgtatgctcgacgcacgactggatgctg
ttcttcaccaacaaggggcgcgtgtaccgggccaaggcgtacgagcttccggaggccagt
agggtggccaagggccagcacgtggccaacttgctggcgttccaaccagacgagcagatc
gcacagatcatcgagattccgaattaccaggtggcgccctacctggtcctggcgacgaag
aacggcctggtgaagaagacgcggcttgaggagttcgactccaaccggtccggcggcatc
atcgcgatcaacctgcgcgatgaggacgagctggtcggtgctgcgctggtcgaccccggc
gaggatctgctgctggtctccaagaacgcccaggccatccggttcaacgcgacggacgac
gcgctgcggccgatgggccgggccacgtcgggtgtgatcggcatgcgcttcagcgacgag
gacgagctgctggccatggaggtggtccgcgaggggctggacgtactcgtcgccacgaac
gggggatacgcgaaacgtaccccgatcgaggaatacccggtccagggccggggaggtaag
ggcgtactgactgcgaagatcaccgaacggcgcggtggtctggtcggtgccgtcgtgatc
gacccggacgacgagctgtttgccatcaccagcaacggtggcgttatccggactccggtg
aagcctgtacgccgtacacgcgaccggaacacaatgggggtcaagctgatggacctcccg
gatggcgtgactatcgtggcgattgctcgcaatgccgacgagcctgacgaacaggactag
DBGET
integrated database retrieval system
