Verrucosispora sp. NA02020: HUT12_02775
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Entry
HUT12_02775 CDS
T06958
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ver
Verrucosispora sp. NA02020
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ver03032
]
HUT12_02775 (topA)
03400 DNA repair and recombination proteins [BR:
ver03400
]
HUT12_02775 (topA)
Enzymes [BR:
ver01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HUT12_02775 (topA)
DNA replication proteins [BR:
ver03032
]
Prokaryotic type
DNA Topoisomerases
HUT12_02775 (topA)
DNA repair and recombination proteins [BR:
ver03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUT12_02775 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MarR_2
Toprim_2
HC2
SBP_bac_3
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
QKW16975
UniProt:
A0A7H8KJR3
LinkDB
All DBs
Position
591572..594427
Genome browser
AA seq
951 aa
AA seq
DB search
MPSNAGTTRLVIVESPAKAKTISGYLGPGYVVEASFGHVRDLPRNAADVPARYKGESWAR
LGVDVDNGFHALYVVSADRKQQISKLTKLAKEVDEIFLATDEDREGEAIAWHLVETLKPK
VPVRRMVFHEITKPAIQAAVANPREIDRDLVDAQEARRILDRLYGYEVSPVLWKKVMPRL
SAGRVQSVATRIVVERERQRMAFRTAEYWDILATLAVTNAGEGPRTFNATLVALNGDRIA
TGKDFEPTTGRVKPGAGVVHLDESGARGLAARLDGRPFTVTRVEEKPYRRRPYAPFITST
LQQEAARKLRFSSQQTMRTAQRLYENGYITYMRTDSVSLSETAIAAARRQIVELYGERSV
PPEPRRYTGKVKNAQEAHEAIRPAGDNFRTPGEVAKELSAEEFKLYELIWRRTIASQMTD
AVGSSVSVRIRATTVGGEEADFGATGKTITDPGFLRAYVESSDDENAEAEDAERRLPNLV
KDQPLTADQLAAQGHHTQPPARYTEASLVKALEELGIGRPSTYASIMQTIQDRGYVVKRG
QAMIPSFLAFAVIGLMERHYPRLIDYDFTASMENELDEIAGGDHAAVDFLTAFYFGTTNG
AGDQDIARSGGLKKLVTENLSDIDARSVNSIPLFSDEEGREVVVRVGRYGPYLQRRVPGE
EQAPAAEGEEGAAPGDRAPIPEGLAPDELTPEKVHELFLGGGGERKLGDDPATGEPIVLK
SGRFGPYVASGERKSSLLRSQSPDSLTFDEALKLLSLPRVIGVAPDGAEVVANNGRYGPY
VKQGDEFRSLDSEDKMFTVTLDEALALLAAPKNRQRRAAAPPLREMGADPLTEKPLVIKD
GRFGPYVTDGETNASLRRGQTPEALTLEEASEMLAEKRAKGPAPKKKAAAKKAPAKKAPA
KAGAAKTAASKSTATKATASKSASKAAASKAAPRKAAPKKATAAKKAPAAD
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagcaacgctggaaccacccgtctggtcatcgtcgagtctccggcgaaggccaag
acgatctcgggctacctcggcccggggtacgtcgtggaggccagcttcgggcatgtccgc
gacctgccgcgtaacgctgccgacgtgcccgcccggtacaagggcgagtcctgggcccgg
ctcggcgtcgacgtcgacaacggcttccacgccctctacgtcgtctccgccgaccgcaag
cagcagatcagcaagctgaccaagctcgccaaggaggtcgacgagatcttcctggcgacg
gatgaggaccgcgagggcgaggcgatcgcctggcacctggtcgagacgctcaagccgaag
gtgccggtccggcggatggtcttccacgagatcaccaagccggcgatccaggcggcggtg
gccaacccccgggagatcgaccgcgacctggtcgacgcccaggaggcccggcgcatcctc
gaccgcctctacggctacgaggtctccccggtgctgtggaagaaggtcatgccgaggctc
tcggcgggccgggtgcagtccgtggctacccggatcgtggtcgagcgggagcggcagcgg
atggccttccgcaccgccgagtactgggacatcctggccacgctcgccgtgacgaacgcc
ggtgagggcccgcgcaccttcaacgccaccctggtcgcgctgaacggcgaccggatcgcc
accggcaaggacttcgagcccaccaccggccgggtcaagcccggcgccggcgtggtgcac
ctcgacgagagcggagcgcgggggctcgccgcccgcctcgacgggcggccgttcaccgtc
acccgcgtcgaggagaagccgtaccgccgtcgcccgtacgcgcccttcatcacctccacg
ctccagcaggaggcggcccgcaagctgcggttctcgtcgcagcagacgatgcgtaccgcg
cagcggctctacgagaacggctacatcacctacatgcgtaccgactcggtgagcctgtcg
gagaccgccatcgcggcggcccgccgacagatcgtcgagttgtacggcgagcgcagcgtg
ccgccggagccgcgccgctacaccggcaaggtgaagaacgcgcaggaggcgcacgaggcg
atccgcccggccggggacaacttccgtaccccgggcgaggtggccaaggagttgtcggcc
gaggagttcaagctctacgagctgatctggcggcgcaccatcgcctcgcagatgaccgac
gcggtcggctccagcgtctcggtccggatccgggccaccaccgtcggcggcgaggaggcc
gacttcggcgccaccggcaagaccatcaccgacccgggcttcctgcgcgcgtacgtcgag
tccagcgacgacgagaacgccgaggccgaggacgccgagcgccggctgcccaacctggtc
aaggaccagccgctgaccgccgaccagttggcggcgcagggccaccacacccagccgccc
gcccgctacaccgaggcgtcgctggtcaaggcgctggaggagttgggcatcggtcgcccc
tccacgtacgcgtcgatcatgcagaccatccaggaccgtgggtacgtggtcaagcgcggc
caggcgatgatcccctcgttcctcgcgttcgccgtgatcgggctgatggagcggcactac
ccgcgcctgatcgactacgacttcacggccagcatggagaacgagctggacgagatcgcc
ggtggtgaccacgcggccgtcgacttcctcaccgcgttctacttcggcaccaccaacggt
gccggtgaccaggacatcgcccgttccggtgggctcaagaagctggtcaccgagaacctc
agcgacatcgacgcgcgcagcgtcaactcgatcccgctcttcagcgacgaggagggacgc
gaggtcgtggtgcgggtcggccggtacgggccgtacctccagcgtcgggtgcccggcgag
gagcaggcaccggccgccgagggcgaggagggcgcggccccgggcgaccgggcgccgatc
cccgagggcctcgcgccggacgaactgaccccggagaaggtccacgagctgttcctcggc
ggcgggggcgagcgcaagctcggcgacgacccggcgaccggcgagccgatcgtgctcaag
tccggccggttcggcccgtacgtggccagtggcgaacgcaagtcctcgctgctgcgctcg
cagtccccggactcgctcaccttcgacgaggcgctcaagctgctcagcctgccccgggtg
atcggggtggccccggacggcgcggaggtggtggccaacaacggccgctacggcccgtac
gtcaagcagggcgacgagttccgttcgctggactcggaagacaagatgttcaccgtcacg
ctggacgaggcgctggccctgctggccgcaccgaagaaccggcaacgacgggccgccgcg
ccgccgctgcgggagatgggtgccgacccgttgaccgagaagccactggtcatcaaggac
ggtcggttcggcccgtacgtcaccgacggggagacgaacgcgtcactgcggcgtggccag
accccggaggcgctgaccctggaggaagcctccgagatgctcgccgagaagcgggcgaag
ggtccggcgccgaagaagaaggccgctgccaagaaggcacccgccaagaaggcccccgcc
aaggccggtgccgccaagaccgccgcctcgaagtccaccgccaccaaggccaccgcctcg
aagtcggcgtcgaaggcggcagcctcgaaggccgcaccgaggaaggcggcgccgaagaag
gccaccgccgccaagaaggcccccgccgccgactga
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