Verrucosispora sp. NA02020: HUT12_04540
Help
Entry
HUT12_04540 CDS
T06958
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ver
Verrucosispora sp. NA02020
Pathway
ver03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HUT12_04540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ver03400
]
HUT12_04540
Enzymes [BR:
ver01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HUT12_04540
DNA repair and recombination proteins [BR:
ver03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HUT12_04540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
QKW12132
LinkDB
All DBs
Position
complement(1050835..1052085)
Genome browser
AA seq
416 aa
AA seq
DB search
MSTGGTATGSGTAAGTGASTAEEPWPVRVVSQKIGAWVARLGWVWVDGQVAQISRRPGAS
TVFLTLRDPSADLSLTVTTNRDVLDTGAPELREGARVVLHAKPEFYAARGTLSLRADEIR
QVGLGELLARLEKLKKLLAAEGLFDRARKRRPPFLPQRIGLITGRASAAERDVLTNARRR
WPAVEFRTVNVAVQGPGAVPQIVDALKVLDGDPSIDVIILARGGGGIEDLLPFSDEALCR
AVFACRTPVVSAIGHETDAPLVDYVADVRASTPTDAAKRVVPDLAEEVRLIGQARHRLRR
AVHHLVDRESHRIEALRSRPALARPQVMVEQRAGDLAALRQRAVRCLDHRIAAADDDLRH
TLARLRALSPAATLDRGYAIVQRADGHVVRAAGDVAPGDPLRVRVADGELSATVNP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacgggtgggacggcgaccgggagcgggacggctgccggcacaggcgccagcacg
gcggaggagccgtggccggtgcgcgtggtcagtcagaagatcggcgcctgggtggcgcgc
ctgggctgggtctgggtcgacgggcaggtggcgcagatcagccggcggcccggcgccagc
accgtgttcctcacgttgcgtgacccgtcggcggatctgagcctgaccgtcaccaccaac
cgcgacgtgctcgacaccggcgcgccggagctgcgcgagggcgcccgcgtcgtgctgcac
gccaagccggagttctatgccgcccggggcacgctcagcctgcgggccgacgagatccgg
caggtgggtctcggtgagctgctggcacggctggagaagctcaagaagctgctcgccgcc
gaggggctgttcgaccgggcccgcaagcgccggccgccgttcctgccgcagcggatcggg
ctgatcaccggccgggccagcgccgccgagcgggacgtgctcaccaacgcccgtcgccgc
tggccggcggtggagttccggacggtgaacgtggccgtgcagggccccggtgccgtgccg
cagatcgtggacgcgctcaaggtgctggacggcgacccgagcatcgatgtgatcatcctg
gcccggggcggtggcggcatcgaggacctgctgcccttctccgacgaggccctctgccgg
gcggtgttcgcctgccgtacgccggtggtcagcgcgatcggccacgagacggacgcgccg
ctggtcgactacgtggccgacgtccgcgcgtcgaccccgaccgacgcggccaagcgggtg
gtgcccgacctggccgaggaggtacgcctgatcgggcaggcccgccaccggctgcggcgc
gcggtgcaccacctggtcgaccgcgagtcgcaccggatcgaggcgctgcgctcccgtccg
gcgctggcccgcccgcaggtgatggtggagcagcgggccggtgacctggccgccctgcgc
cagcgggccgtgcgctgcctggaccaccgcatcgccgccgccgacgacgacctgcggcac
accctggcccggctgcgcgcgctctcaccggccgccaccctggaccgggggtacgccatc
gtgcagcgcgccgacggccacgtggtccgcgccgccggcgacgtggcacccggcgacccg
ctgcgggtacgcgtcgccgacggcgaactgtcggccaccgtgaacccctga
DBGET
integrated database retrieval system
