Verrucosispora sp. NA02020: HUT12_08970
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Entry
HUT12_08970 CDS
T06958
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ver
Verrucosispora sp. NA02020
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ver03016
]
HUT12_08970
Enzymes [BR:
ver01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HUT12_08970
Transfer RNA biogenesis [BR:
ver03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HUT12_08970
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QKW12915
UniProt:
A0A7H8K8J0
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All DBs
Position
complement(2043869..2045224)
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AA seq
451 aa
AA seq
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MTDEPPLRRRTAASRTGNDTHHEPSARPEPSDAGTEPTGGESVPLTAPREGTPEPVATPD
QLTEVVARFAAGTGPVALDAERASGYRYSQRAYLVQLRRQGAGTVLIDPLPLPDLSTLDA
AIADTEWVLHAANQDLPCLAELGLRPRRLFDTELAARLAGFERVGLAALTEQLLGFSLEK
HHSAADWSSRPLPESWLTYAALDVELLTDLRDALDAELSRQGKSAWAAEEFAALVNSGDR
PPRVRADPWRRTSGIHRVRGARAQARVRSLWYARDQIAARRDAAPGRVLPDSAIVAAAEL
DPKDEKTLLTLPGFGGRSVRRLARTWLTALDDARQLPDDELPVTPTVEGPPPPHRWAERD
PAAAARLARSREVVLRVAGAHHLPPENLISPDTIRRVAWQPPEEITEHTVAEALRSHHAR
DWQIDLLLPDLAEALTAPPPPPPPASPTPPA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgaaccacccctgcgccgtcggaccgccgcaagccgtacgggaaacgacacg
caccacgagccgtcggcgcggccggagccgtcggacgcggggaccgaacccactggcggc
gagtccgtgccgttgaccgccccacgtgagggcactcccgaaccggtggcgacaccggac
caactcaccgaggtggtggcccgtttcgcggccggcaccggtccggtggccctggacgcc
gagcgcgcctccggctaccgctacagccaacgggcgtacctggtgcagttgcgccgccag
ggcgccggcaccgtgctgatcgacccgttgccgctacccgacctgagcacgctcgacgcg
gcgatagccgacacggagtgggtgctgcacgcggccaaccaggatctgccctgcctcgcc
gagctggggttgcgaccacgccgactgttcgacaccgagctggccgcccggctggccggg
ttcgagcgggtcggcctggccgcgctcaccgagcagttgctcgggttcagcctggagaag
caccactcggcggcggactggtccagccggccgttgccggagtcctggctcacctacgcc
gccctggacgtggagctgctgaccgacctgcgggacgcgctcgacgcggaactgtcccgg
cagggcaagtccgcgtgggcggccgaggagttcgctgcgctggtgaacagcggggaccgt
ccaccccgggtccgggccgacccgtggcggcgcacctccggcatccaccgggtacgcgga
gcgcgggcgcaggcccgggtgcgctccctctggtacgcccgcgaccagatcgccgcccgt
cgggatgcggcaccggggcgggtcctgcccgactcggccatcgtggccgccgccgagctg
gacccgaaggacgagaagacgctgctcaccctgcccggtttcggcggtcggtcggtacgc
cggctggcgcggacctggctgacggcgctggacgacgcccggcagttgccggacgacgag
ttgccggtgacgccgacggtggagggcccgccaccgccgcaccggtgggccgaacgggac
ccggccgccgccgcccggctggcccgttcccgtgaggtggtgctgcgggtggccggcgcg
caccatctgccgccggagaacctgatctccccggacaccatccgccgcgtcgcctggcag
cctcccgaggagatcaccgaacacaccgtcgccgaggcgctccgcagccaccacgcccgg
gactggcagatcgacctcctcctccccgacctggccgaagccctgaccgccccaccccca
cccccaccccccgcctcccccaccccacccgcctga
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