Verrucosispora sp. NA02020: HUT12_10340
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Entry
HUT12_10340 CDS
T06958
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ver
Verrucosispora sp. NA02020
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ver03021
]
HUT12_10340
Transcription machinery [BR:
ver03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUT12_10340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR
HTH_23
HTH_3
MarR_2
DUF7343
Sigma70_ECF
HTH_31
GerE
DUF134
HTH_24
HTH_10
NirdL-like_HTH
HTH_37
DUF7120
Motif
Other DBs
NCBI-ProteinID:
QKW13151
UniProt:
A0A7H8K8H7
LinkDB
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Position
complement(2366395..2367213)
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AA seq
272 aa
AA seq
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MTALTETATAPAPTAPKLDPRSLSDSATDLLNAMAALPAGHPSRAALRDRAIEAWLPLAN
HLAHRYSGRGEPTDDLAQTAAVGLIKAIDKFDPTRGVDFAGYAIPTIIGELKRHFRDRTW
DIRVPRRLQELRLAISDANSSLLQTLGRSPTVADIASHLKLTEEEVLEGLEGARAYNAVS
LSTPTGDGDRATELGDMLGGEDSEFELAELRVALGPALATLDEREQKILTLRFYGNLTQS
QIAEQIGVSQMHVSRLLARALTKLRGQLDGTY
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgctcaccgaaacggcgactgccccggcgcccacggcaccgaagctcgacccg
cgttcgctctccgacagcgccaccgacctactcaacgcgatggccgcgctgccggccggg
cacccgtcccgggccgcgctgcgcgaccgggcgatcgaggcctggctgccgctggcgaac
cacctcgcgcaccgctacagcggacgcggggagcccaccgacgacctggcccagaccgcc
gccgtcggcctcatcaaggccatcgacaagttcgacccgacccggggcgtcgacttcgcc
ggctacgcgatccccacgatcatcggcgagctcaagcggcacttccgcgaccgcacctgg
gacatccgcgtcccccggcggctccaggaactgcggctggccatctccgacgccaacagc
tcgctgttgcagaccctgggtcgctcgccgacggtggccgacatcgccagccacctcaag
ctcaccgaggaagaggtcctggagggcctggagggtgcccgcgcctacaacgcggtgtcg
ctgtccaccccgaccggtgacggcgaccgggcgaccgagctgggcgacatgctcggcggc
gaggacagcgagttcgagctggccgagctgcgggtggccctcgggccggcgctggccact
ctggacgagcgcgagcagaagatcctcacgctgcgcttctacggcaacctcacccagtcg
cagatcgccgagcagatcggcgtctcgcagatgcacgtgtcccggctgctggcccgggcg
ctgacgaagctgcgggggcagctcgacggcacgtactaa
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