Verrucosispora sp. NA02020: HUT12_10485
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Entry
HUT12_10485 CDS
T06958
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ver
Verrucosispora sp. NA02020
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ver03032
]
HUT12_10485
03400 DNA repair and recombination proteins [BR:
ver03400
]
HUT12_10485
Enzymes [BR:
ver01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HUT12_10485
DNA replication proteins [BR:
ver03032
]
Prokaryotic type
DNA Topoisomerases
HUT12_10485
DNA repair and recombination proteins [BR:
ver03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUT12_10485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QKW13178
UniProt:
A0A7H8K8L4
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All DBs
Position
2394627..2395610
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AA seq
327 aa
AA seq
DB search
MRLRRSDPGRPGYGRRRRGPGWSFVDPRGEPVRDPDDLARLRALVIPPAWRQVWISPHPN
GHIQAIGTDAAGRKQYLYHPMWRQRQDEAKFEHVLEVARRLPVLRERVGHDLTGRGLRRE
RVLATVTRLLDMGTFRVGSDQYAAGDDPTFGVATLRPEHARSRQGCVVFEFPAKGGIEQV
RRVSDPELCRVLTHLRRSRRAADRLFGYWDGRQWRDVRADEVNDYLRDASGGEMTAKDFR
TWHATVRAATELAVLGQPRSVTARRRAVAGVMREVAELLGNTPTVARTSYVDPRVVDLFH
DGVVVPVTRDTDREQAERAVLDLLDRS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgcggttgcggcgtagtgatccgggtcggccgggatacggccgccggcgacgcggtccg
ggctggtcgttcgtcgacccgcgcggcgagccggtgcgcgacccggacgacctggcccgg
ctgcgtgccctggtcatcccgccggcctggcgccaggtgtggatctcgccgcacccgaac
gggcacatccaggccatcgggaccgacgccgccggccgcaagcagtacctctaccacccg
atgtggcggcagcggcaggacgaggccaagttcgagcacgtgctggaggtggcccgccgg
ctgccggtgctgcgcgaacgggtcggccacgacctgaccgggcgcgggctgcgccgcgag
cgggtgctggccaccgtgacccggctgctcgacatgggcaccttccgggtcggcagcgac
cagtacgcggccggggacgacccgacgttcggcgtcgccaccctccgccccgaacacgcc
cggtcccgccagggctgcgtggtcttcgagttcccggcgaagggcggcatcgagcaggtg
cgtcgggtctccgacccggagctgtgccgggtgctcacccatctgcgtcgcagtcgccgg
gcggcggaccggttgttcggctactgggacggccggcagtggcgcgacgtgcgggccgac
gaggtcaacgactacctgcgcgacgccagcggcggcgagatgaccgccaaggacttccgc
acctggcacgccaccgtccgggcggccaccgaactggccgtcctcgggcagccgaggtcg
gtcaccgcccgtcggcgcgcggtggccggcgtgatgcgcgaggtggcggagctgctcggc
aacaccccgacggtggcccggacgtcctacgtggacccgagggtggtcgacctgttccac
gacggtgtggtggtgccggtcacccgggacaccgaccgcgagcaggccgagcgcgccgtg
ctcgacctgctggaccggtcctga
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