Verrucosispora sp. NA02020: HUT12_10510
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Entry
HUT12_10510 CDS
T06958
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ver
Verrucosispora sp. NA02020
Pathway
ver03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUT12_10510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ver03019
]
HUT12_10510
03400 DNA repair and recombination proteins [BR:
ver03400
]
HUT12_10510
Enzymes [BR:
ver01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUT12_10510
Messenger RNA biogenesis [BR:
ver03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUT12_10510
DNA repair and recombination proteins [BR:
ver03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HUT12_10510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
HRDC
PcrA_UvrD_tudor
TrmB
Motif
Other DBs
NCBI-ProteinID:
QKW13182
UniProt:
A0A7H8KAZ2
LinkDB
All DBs
Position
complement(2398858..2400489)
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AA seq
543 aa
AA seq
DB search
MKLTTHSMSLRRAARSLFGWSTLRPNQLAAMRAVMRRRDALVVLPTGAGKSAIYQIPASL
IPGPTVVISPLLALQQDQIAALNERQRAELRAVRISSDESPAQQAEAIAEIRDGRAEFLF
ITPEQLANPDRLAEVRALKPALVAIDEAHCISAWGHDFRPDYLALGQLIEGIGRPPVVAL
TATASPPVRDDIVARLRLRDPEIVVSGLDRPNLFFEVAHCPTEDYRWRRLIALLRDEERP
GIIYVPTRRAAEDLAARITDADYPAQFYHGGMSASARARLHEAFLADQVPIMVATSAFGM
GIDKPNIAWVVHMALPDSPDSYFQEIGRAGRDGQPARVLLLWQAEDVGLQRFFSGGLPDA
TELRDLAALLRQGPATKKELREVTGLGPRKLGQYLALLEQVGAAQPRARQRIGAPRYSPT
PVEAAEAAVAEAERQQNLTRSRTDMMRAFAETTGCRGQTLLAYFGEQMTQICGHCDNCHA
GTSTADDGAVGPFPVHSQVRHPEWGGGLVLSYEDDRMTVLFEEVGYKTLSVSVVSEQGLL
TLD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccacgcactcgatgtcgttgcgccgcgcggcgcgcagcctgttcggctgg
tccaccctgcgccccaaccaactggccgcgatgcgcgcggtgatgcggcggcgcgacgcg
ttggtggtgctgcccaccggcgccggcaagtcggcgatctatcagatcccggcgagcctg
atccccggcccgaccgtggtcatctcccccctgctcgccctgcaacaggaccagatcgcc
gcgctcaacgagcggcaacgggccgagttgcgggcggtccggatcagctcggacgagtcg
ccggcccagcaggccgaggcgatcgccgagatccgcgacggccgggccgagttcctcttc
atcaccccggagcagttggccaacccggaccggctggccgaggtgcgcgcgttgaagccg
gcgctggtcgcgatcgacgaggcgcactgcatctcggcctgggggcacgacttccgcccg
gactacctggcactcggtcagctcatcgagggcatcgggcggccgccggtggtggcactg
accgccaccgcctcgccgccggtacgcgacgacatcgtggcccggctgcggctgcgtgat
cccgagatcgtggtgtccggactggaccgaccgaacctcttcttcgaggtggcgcactgc
ccgaccgaggactaccggtggcggcggctgatcgccctgctgcgcgacgaggagcggccg
ggcatcatctacgtacccacccggcgggccgccgaggacctcgcggcccggatcaccgac
gccgactacccggcgcagttctaccacggtggaatgtccgccagtgcccgcgcccggctg
cacgaggcgttcctcgccgaccaggtgccgatcatggtcgccacgtcggcgttcggcatg
ggcatcgacaagccgaacatcgcctgggtggtgcacatggcgctgcccgactcgccggac
agctacttccaggagatcggccgggccgggcgcgacggccagcccgcccgcgtcctgctg
ctctggcaggccgaggacgtcggcctgcaacgcttcttcagcggtggcctgccggacgcc
accgagttgcgggacctggccgccctgctgcggcagggaccggccaccaagaaggagctg
cgcgaggtgaccgggctggggccgcgcaagctcgggcagtacctggccctgctggagcag
gtcggtgcggcgcagccgcgcgcccggcagcggatcggcgcgccgcgctactcgccgacc
ccggtggaggccgccgaggcggccgtggccgaggccgagcggcagcagaacctgacccgc
tcacggaccgacatgatgcgggccttcgccgagaccacgggctgccgggggcagaccctg
ctggcctacttcggcgagcagatgacccagatctgcgggcactgcgacaactgccacgcc
ggcaccagcaccgccgacgacggcgcggtgggtccgttcccggtgcacagccaggtgcgg
cacccggagtggggcggcggcctggtgctcagctacgaggacgaccggatgacggtcctc
ttcgaggaggtcgggtacaagacgctgtcggtcagcgtggtgtccgaacagggactgctg
acgctggactaa
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