Verrucosispora sp. NA02020: HUT12_10745
Help
Entry
HUT12_10745 CDS
T06958
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ver
Verrucosispora sp. NA02020
Pathway
ver03030
DNA replication
ver03430
Mismatch repair
ver03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUT12_10745 (dnaE)
03430 Mismatch repair
HUT12_10745 (dnaE)
03440 Homologous recombination
HUT12_10745 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ver03032
]
HUT12_10745 (dnaE)
03400 DNA repair and recombination proteins [BR:
ver03400
]
HUT12_10745 (dnaE)
Enzymes [BR:
ver01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUT12_10745 (dnaE)
DNA replication proteins [BR:
ver03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUT12_10745 (dnaE)
DNA repair and recombination proteins [BR:
ver03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUT12_10745 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QKW13225
UniProt:
A0A7H8K9E0
LinkDB
All DBs
Position
2444873..2448406
Genome browser
AA seq
1177 aa
AA seq
DB search
MGDSFAHLHVHTEYSMLDGAARLKDLFAEVKRQGMPAVAMTDHGNMHGANDFYKQAMAAG
VTPILGIEAYVAPESRFHKKRVRWGRPEQKSDDVSGSGGYTHKTIWARNKTGLHNLFTLT
SKAYTEGYFVKWPRMDAELLAECADGLMATTGCPSGEVQTRLRLGHDAQALEAAAKYQDI
FGKENYFLELMDHGLDIEKRVRDGLVEIGRKLGIPPVVTNDSHYTHEAQSEAHDVLLCVQ
TGSNVADPNRFKFGGSGYYIKSADEMRGVDGSDVWLEGCRNTLLVAERVDPTGMFEFHNL
MPRFPVPEGETEESWFRKETFVGLARRYPQGIPEGHVVQAEYELGVIIQMGFPSYFLVVA
DFIQWAKNQGIAVGPGRGSAAGSLVAYALGITDLDPIPHGLIFERFLNPERVSMPDVDID
FDERRRGEVIKYVTDKWGEDKVAQIATFGTIKAKAAIKDSARVLGYPYAVGDRITKAMPP
AVMGKDIPLEGIFDPKHPRYAEAGEIRGMYESEADVKKVIDTARGIEGLIRQTGVHAAGV
IMSAEPIIEHIPLMRRDSDGVIITQFDYPTCESLGLLKMDFLGLRNLTIIDDAVKNIQLN
HGKELDLLGLPLDDKPAYELLARGDTLGVFQLDGGPMRSLLRMMKPDNFEDISAVLALYR
PGPMGVDSHTNYALRKNGLQEITPIHPELEEPLREILAPTYGLIVYQEQVQRAAQILAGY
TLGQADLLRRAMGKKKKEILDKEFGPFRDGCREHGYSDEAVQKVWDVLVPFAGYAFNKAH
SAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDDKDKMAMYLSECRRMGIQVLPPDVNTSA
GPFTPVGKEIRFGLGAIRNVGANVVAAIMRCRDEKGEYADFYDFLSKVDAVVCNKKTIES
LIKAGAFDSLKHSRKALLTVHADAIDAYADVKRKEAVGQYDLFGSGFGDTETATTTTVMP
VISDGEWDKRDKLAFEREMLGLYVSDHPLFGLEHVLNAAADCTIATLSEEGTVPDGAVVT
LAGILSGVQRRVTKQGRAWASATLEDLAGGVEALFFPNTYEVIGQYIAEDAIVVVKGRID
RRDDTPRIMAMDMQLPDVSSNPASKPVTLTIPVNRLTPPLADRLKETLLLHPGDTEVHVK
LHRSGRVETWRLGLFRVAATTALMGDLKSVLGPANVS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgattcgttcgcgcatctgcacgtgcacacggagtactcgatgctcgacggtgcg
gcccgcctcaaggacctgttcgccgaggtcaagcggcaggggatgccggccgtggcgatg
accgaccacggcaacatgcacggcgcgaacgacttctacaagcaggccatggccgccggg
gtcaccccgatcctgggcatcgaggcgtacgtggcgccggagtcgcggttccacaagaag
cgggtgcgctggggtcgcccggagcagaagagcgacgacgtctccggcagtggcggttac
acgcacaagacgatctgggcgcgcaacaagaccggcctgcacaacctcttcacgctgacc
agcaaggcgtacaccgagggctacttcgtcaagtggccccggatggacgccgagctgctg
gccgagtgcgccgacgggctgatggcgaccaccggctgcccctccggcgaggtgcagacc
cggctgcggctcggccacgacgcgcaggccctggaggccgccgcgaagtaccaggacatc
ttcggcaaggagaactacttcctggagctgatggaccacggcctggacatcgagaagagg
gtccgggacgggctggtcgagatcggtcgcaagctgggcatcccgccggtggtcaccaac
gactcgcactacacgcacgaggcgcagtccgaggcgcacgacgtgctgctctgcgtgcag
accggcagcaacgtcgccgacccgaaccggttcaagttcggcggcagcggctactacatc
aagtccgccgacgagatgcgcggtgtggacggctccgacgtctggctggagggctgccgc
aacacgctgctggtggccgagcgggtcgacccgaccgggatgttcgagttccacaacctg
atgccgcgcttcccggtgcccgagggcgagaccgaggagtcctggttccgcaaggagacc
ttcgtcggcctggcccgccgctacccgcagggcatccccgagggccacgtcgtgcaggcc
gagtacgagctgggcgtcatcatccagatgggtttcccgtcgtacttcctcgtggtcgcc
gacttcatccagtgggccaagaaccagggcatcgcggtcggccccggccggggttcggcg
gccggttcgctggtcgcgtacgcgctgggcatcaccgacctggacccgatcccgcacggg
ctgatcttcgagcggttcctcaaccccgagcgcgtctccatgccggatgtcgacatcgac
ttcgacgagcgtcggcgcggtgaggtgatcaagtacgtcaccgacaagtggggcgaggac
aaggtggcgcagatcgccaccttcggcacgatcaaggcgaaggccgcgatcaaggactcg
gcgcgggtgctcggctacccgtacgcggtcggcgaccggatcaccaaggccatgccgccg
gccgtgatgggcaaggacatcccgctcgaaggcatcttcgacccgaagcacccccggtat
gccgaggccggcgagatccggggcatgtacgagtccgaggccgacgtcaagaaggtcatc
gacaccgcccggggcatcgaggggctgatccggcagaccggtgtgcacgccgccggtgtg
atcatgtcggccgagccgatcatcgagcacatcccgctgatgcgtcgggactccgacggg
gtcatcatcacccagttcgactacccgacgtgcgagtcgctcgggctgttgaagatggac
ttcctcggcctgcgcaacctcaccatcatcgacgacgcggtcaagaacatccagctcaac
cacggcaaggaactcgacctgctgggcctgccgctggacgacaagcccgcgtacgagctg
ctggcccggggcgacaccctgggcgtgttccaactcgacggcgggccgatgcggtcgctg
ctgcggatgatgaagccggacaacttcgaggacatctccgccgtgctggcgctgtaccgc
cccggcccgatgggcgtcgactcgcacaccaactacgcgctgcgcaagaacggcctccag
gagatcaccccgatccacccggagctggaggagccgctgcgggagatcctcgcccccacc
tacggcctgatcgtctatcaggagcaggtgcagcgcgccgcgcagatcctcgccggctac
acgctcggccaggccgacctgctgcgtcgggcgatgggcaagaagaagaaggagatcctc
gacaaggagttcggcccgttccgggacggctgccgcgaacacggctactccgacgaggcc
gtccagaaggtctgggacgtgctggtcccgttcgccgggtacgccttcaacaaggcgcac
tcggccgcgtacgggctggtgtcgtactggacggcgtacctgaaggcgcactacccggcc
gagtacatggcggcgctgctgacctccgtcggcgacgacaaggacaagatggccatgtac
ctgtcggagtgccgccggatgggcatccaggtgctgccgccggacgtgaacacctccgcc
gggccgttcaccccggtcggcaaggagatccgcttcggcctcggcgcgatccgcaacgtc
ggcgccaacgtggtggcggcgatcatgcggtgccgcgacgagaagggcgagtacgcggac
ttctacgacttcctgtccaaggtggacgcggtggtctgcaacaagaagaccatcgaatcg
ctgatcaaggccggggcgttcgactcgctcaagcattcgcgcaaggcgctgctcaccgtg
cacgccgacgccatcgacgcgtacgccgacgtgaagcgcaaggaggccgtcggccagtac
gacctcttcggttcgggcttcggcgacaccgagacggcgaccaccaccacggtcatgccc
gtcatcagcgacggcgagtgggacaagcgcgacaagctcgcgttcgaacgcgagatgctc
ggcctgtacgtctccgaccacccgctgttcggtctggaacacgtgctgaacgcggcggcc
gactgcaccatcgccaccctgtccgaggagggcaccgtgcccgacggcgcggtggtcacc
ctcgccggcatcctctccggcgtgcagcgtcgggtcaccaaacagggccgagcgtgggcc
tcggcgaccctggaggacctggccggtggggtggaggcgctgttcttcccgaacacctac
gaggtgatcggacagtacatcgccgaggacgccatcgtggtggtcaagggccggatcgac
cggcgcgacgacaccccccgcatcatggcgatggacatgcagttgccggacgtcagcagc
aacccggcgagcaaaccggtcaccctgacgattccggtcaaccggctcacgccaccgctc
gccgaccggctcaaggagaccctgctgctgcatcccggcgacaccgaggtgcacgtgaag
ctgcaccgcagcgggcgcgtcgagacctggcgactcggcctgttccgggtcgccgccacc
accgccctgatgggtgacctcaagagcgtcctcggccccgccaacgtgagctga
DBGET
integrated database retrieval system
