Verrucosispora sp. NA02020: HUT12_17060
Help
Entry
HUT12_17060 CDS
T06958
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
ver
Verrucosispora sp. NA02020
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ver03051
]
HUT12_17060 (pafA)
Enzymes [BR:
ver01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
HUT12_17060 (pafA)
Proteasome [BR:
ver03051
]
Prokaryotic proteasome
Bacterial regulatory particles
HUT12_17060 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QKW14316
LinkDB
All DBs
Position
3952134..3953492
Genome browser
AA seq
452 aa
AA seq
DB search
MERRIFGLETEYGVTCTYRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDSVVDLVAHDRAGERILEGLLIDAEKRLHDEGIAGEIYLFKNNTDSAGNSY
GCHENYLVSRHGEFGRLADVLIPFLVTRQLICGAGKVLQTPRGAVYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMNEVTTLLKVGTADIVLRMIEAGVVM
RDLTLENPIRAIREVSHDITGRRKVRLASGKEISALEIQQEYLSKAIEFVERRGGDQTAK
RVVELWGRVLSAVESGDLEPVSREIDWVTKLRLIERYQRKHDLPLSHPRVAQMDLAYHDL
RRGRGLYALLERRGDVDRVATDPEIFEAKETPPQTTRARLRGEFIRHAQEKRRDFTVDWV
HLKLNDQAQRTVLCKDPFRAYDERVERLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcgaatcttcggtctggagaccgagtacggcgtcacctgcacctaccgtggg
cagcggcggctgtcccctgacgaggtagccagatacctgttccgccgagtggtgtcctgg
ggccggtcgagcaacgtcttcctccgcaacggcgcacgtctctatctcgacgtcggctca
cacccggagtacgccaccccggagtgcgactcggtggtcgacctggtcgcccacgaccgg
gccggtgagcggatcctggagggtctgctcatcgacgcggagaagcggctgcacgacgag
ggcatcgccggtgagatctacctgttcaagaacaacaccgactcggccggcaactcctac
gggtgccacgagaactacctggtgtcccggcacggggagttcggccggctcgccgacgtc
ctgatcccgttcctggtcacccggcagttgatctgtggcgccggcaaggtgctgcagacc
cctcgcggtgccgtctactgcctgtcccagcgggccgaacacatctgggagggcgtctcc
tcggcgaccacccgcagccgcccgatcatcaacacccgggacgagccgcacgccgacgcc
gagcggtaccgccgcctgcacgtcatcgtcggcgactccaacatgaacgaggtcaccacg
ctgctcaaggtcggcaccgccgacatcgtgctgcggatgatcgaggccggggtggtgatg
cgcgacctcaccctggagaacccgatccgggccatccgcgaggtgtcgcacgacatcacc
ggtcgccgcaaggtgcggctggcctccggcaaggagatcagcgcgctggagatccagcag
gagtacctctccaaggcgatcgagttcgtcgagcggcgcggcggcgaccagaccgccaag
cgggtcgtcgagctgtgggggcgggtcctcagcgcggtggagagcggtgacctggagccg
gtctcccgcgagatcgactgggtcaccaagctccggctgatcgagcgctaccagcgcaag
cacgacctgccgctgtcgcacccccgggtggcgcagatggacctcgcctaccacgacctg
cgccggggacgtgggctctacgccctgctggagcggcgtggcgacgtggaccgggtggcc
accgacccggagatcttcgaggcgaaggagacgccgccgcagaccacccgggcccgactg
cgcggcgagttcatccggcacgcccaggagaagcggcgggacttcaccgtcgactgggtg
cacctcaagctcaacgaccaggcgcagcgcaccgtgctgtgcaaggacccgttccgggcg
tacgacgagcgggtggagcggttgatcgccagcatgtga
DBGET
integrated database retrieval system
