Verrucosispora sp. NA02020: HUT12_19980
Help
Entry
HUT12_19980 CDS
T06958
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ver
Verrucosispora sp. NA02020
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ver03021
]
HUT12_19980
Transcription machinery [BR:
ver03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUT12_19980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma70_ECF
MarR_2
HTH_Tnp_4
HTH_28
MarR
DUF7343
HTH_24
HTH_Crp_2
HTH_3
IF2_N
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QKW14832
LinkDB
All DBs
Position
complement(4586457..4587326)
Genome browser
AA seq
289 aa
AA seq
DB search
MFGQTTTTTPPPTDRGLEDLDAAALAYAARIAGLPPERRHEARDDLVRFALPFAGRLARR
YRGRGEPLEDLEQVARLGLVNAVDRYDPERGSFTAYAAITIVGEIKRHFRDRTWGVHVPR
RLRDLILEVGQATAALTSELSRAPTVAELSKRLETPEEEILAALESAAGYSPASLNAPVG
GESSAEFGDLVGESDIALESVDDRVTVSGLLHRLPWRERRILAMRFYGNQTQAEIAARFG
ISQMHVSRLLSRALTWLRQAMLADAPPPWQNGPAESETAPAKTAARPVR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgttcggacagaccaccacgaccacaccaccaccgacggaccgggggctggaggatctc
gacgcggcggcgctcgcgtacgcggcgcggatcgccgggctgccgcccgagcgccgccac
gaggcgcgggacgacctggtccgcttcgcgttgccgttcgcgggccggctggcccgccgc
taccggggacgcggggaaccgctggaggatctggaacaggtggcccgtctggggctggtc
aacgccgtcgaccggtacgacccggaacgcggctcgttcaccgcgtacgccgcgatcacc
atcgtgggtgagatcaagcggcatttccgggatcgcacctggggtgtgcacgtgccccgc
cggttgcgtgacctgatcctggaggtcggacaggcgacggcggcgctgaccagcgagctg
tcccgcgcgcccaccgtggccgaactgtccaagcggctggagacgccggaggaggagatc
ctcgccgcgctggagtcggcggccggctacagcccggcctcgctcaacgcgccggtcggc
ggggagagctcggccgagttcggtgacctggtgggcgagtcggacatcgcgctggagtcc
gtcgacgaccgggtgacggtcagcgggctgctgcaccggctgccctggcgggagcggcgc
atcctggcgatgcgcttctacggcaaccagacccaggccgagatcgccgcccgcttcggc
atctcccagatgcacgtctcgcgtctgctgtcgcgagccctgacctggttgcggcaggcg
atgctcgcggacgcgccgccgccctggcagaacggcccggccgagtccgagaccgcgccg
gcgaagacggcggcccggccggttcggtaa
DBGET
integrated database retrieval system
