Verrucosispora sp. NA02020: HUT12_20910
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Entry
HUT12_20910 CDS
T06958
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ver
Verrucosispora sp. NA02020
Pathway
ver00040
Pentose and glucuronate interconversions
ver01100
Metabolic pathways
ver02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HUT12_20910
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUT12_20910
Enzymes [BR:
ver01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HUT12_20910
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
PH1_SSRP1-like
Motif
Other DBs
NCBI-ProteinID:
QKW14993
UniProt:
A0A7H8KEY3
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Position
4784485..4785843
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AA seq
452 aa
AA seq
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MHRIAAGAALIILTLSAAPAPAAAHPGPTDGPDTLSVLARQIGRQALPTNDGWAAAGPGT
TGGSAATADQVHVVDSRQDLVAALGGNNATNATNTTPKIIFVKGEIDGFEDADGRLLDCT
DLADPGYSLDAYLAAYDPATWGRVAPSGPVEEARVRSVTNQTRQTQINVGPNTTIVGLRG
ARLTGLTLMIDRAPNVIVRNITFDDARDCFPAWSPTDGETGNWNSQYDLVSVRRSENVWI
DHNTFTDGDNPDSGQPIHFGRPYQVHDGALDITHTASLVTASWNRFDGRDKLMLIGSSNT
VGPDVGRLNVTLHHNLFDEALQRLPRVRFGQVDLYNNQYRLTGDGFEYAIGVGVQSAVYA
ENNHFTLGAGITAADLLYDWSGTAITTRGNWVQAAGKLPRPVDLVAAYNVAHDPDLSPDA
GWTPTLRHGPVLPAPLVPLVVGPLAGADRLPL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaattgccgccggtgcggcattgatcattctcaccctgagcgccgcacccgcc
ccggcggcggcgcaccccggcccgacggacggcccggacaccctgtccgtgctggcccgc
cagatcggccgacaggcgctgccgacgaacgacggctgggcggcggccggaccgggcacc
accggcggctccgccgccaccgccgaccaggtccacgtggtcgacagtcgccaggacctg
gtcgccgcgctcggcgggaacaacgccaccaacgcgaccaacaccaccccgaagatcatc
ttcgtcaagggcgagatcgacgggttcgaggacgccgacgggcgactgctcgactgcacc
gacctggccgaccccgggtactcactggacgcctacctggccgcgtacgacccggcgacg
tggggccgggtcgcaccgagcggaccggtggaggaggcccgggtccggtcggtgacgaac
cagacccggcagacccagatcaacgtcggcccgaacaccaccatcgtcgggctgcgcggg
gcacggctgaccggcctcaccctgatgatcgaccgggcgcccaacgtcatcgtccgcaac
atcaccttcgacgacgcccgggactgcttccccgcctggtcccccaccgacggcgagacg
ggcaactggaactcccagtacgacctggtctcggtccgccgcagcgagaacgtctggatc
gaccacaacacgttcaccgacggagacaaccccgacagcggccaaccgatccacttcggg
cgcccgtaccaggtgcacgacggcgcgctggacatcacgcacacggcgagcctggtcacc
gcctcctggaaccggttcgacgggcgggacaagctgatgctgatcggctcctccaacacc
gtcggcccggacgtcggccgactcaacgtcaccctgcaccacaacctgttcgacgaggca
ctccagcggctgccccgggtccgcttcgggcaggtcgacctctacaacaaccagtaccgc
ctgaccggcgacggtttcgagtacgccatcggcgtcggcgtgcagtccgccgtgtacgcc
gagaacaaccacttcacgctcggcgccggcatcaccgccgccgacctgctctacgactgg
agcggcaccgcgatcaccacccggggcaactgggtgcaggccgccggcaagctaccccgc
ccggtggacctggtggccgcgtacaacgtcgcacacgaccccgacctgtcgcccgacgcc
ggctggacgccgacgctgcggcacggaccggtcctcccggcaccactggtgcccctcgtc
gtcggcccgctcgccggagccgaccgcctgccgctctga
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