Verrucosispora sp. NA02020: HUT12_23855
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Entry
HUT12_23855 CDS
T06958
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ver
Verrucosispora sp. NA02020
Pathway
ver03030
DNA replication
ver03410
Base excision repair
ver03420
Nucleotide excision repair
ver03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUT12_23855 (polA)
03410 Base excision repair
HUT12_23855 (polA)
03420 Nucleotide excision repair
HUT12_23855 (polA)
03440 Homologous recombination
HUT12_23855 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ver03032
]
HUT12_23855 (polA)
03400 DNA repair and recombination proteins [BR:
ver03400
]
HUT12_23855 (polA)
Enzymes [BR:
ver01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUT12_23855 (polA)
DNA replication proteins [BR:
ver03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HUT12_23855 (polA)
DNA repair and recombination proteins [BR:
ver03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HUT12_23855 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUT12_23855 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
QKW15504
UniProt:
A0A7H8KG32
LinkDB
All DBs
Position
complement(5370440..5373139)
Genome browser
AA seq
899 aa
AA seq
DB search
MTATTPRLLLVDGHSLAYRAFFALPVENFSTTTGQPTNAVYGFTSMLINVLRDERPTHIV
VAFDVSRRSFRTERYAEYKAGRSETPSDFKGQVSLVKEVLAALRVPVVEKEGYEADDVIA
TLACQARDQGMPVLISTGDRDAFQLVGDQVTVLYPRKGVSDLARMDPAAIEAKYGVGPQR
YRDLAALVGETSDNLPGVPGVGPKTAAKWINTYGGVEGVIARADEIKGKAGDSLRERLAD
VIRNYEINCLVTDLDLPVRPEDARWSGWDREAVHQVFDTLQFRILRDRLYQYLDAVEPEA
EAGFDLTGEVLAAPGALAGWLETHATPGTPVGVAAKLDTGPNRRHTAVVTGMALATGDGA
AAWFDPSTLGQDDETALAGWLADENRPKVLHDSKPAVLAFGAHGWSLAGIARDTQIAAYL
ARPDQRSYDLTDLALRYLHRELRVDEPDDGQLTLDGLGGDSEAEQNLMVHARATLDLAEA
IDAELSRDGEQSARLMAGVELPLMRVLAAMERTGIAADTGYLSELEAHFAAEVKAAAQGA
YAVVDREFNLGSPKQLQEILFGELNLPKTKKIKTGYTTDADALQWLYAQTEHPLLHHLLR
HRDVAKLKSTVDGLLKSVSDDGRIHTTFNQTVAATGRLSSTEPNLQNIPIRTEEGRRIRR
AFVVGEGYECLLTADYSQIEMRIMAHLSTDDALIEAFNSGADFHAATASSVFGVPVTEVT
PDQRRKIKAMNYGLAYGLSAFGLSQQLGITAEEARGLMEDYFAGFGGVRDYLQEVVARAR
QDGYTSTILGRRRYLPDLVSDNRQRREMAERMALNAPIQGSAADIIKVAMLHVDTALREA
GLGSRMLLQVHDELVFEVAPGERTAVEELVRREMGAAYPLSVPLEVSVGEGRDWNSADH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
gtgacagctacgacgccgcgcctgctcctcgtcgacggacactccctggcataccgggcg
ttcttcgccctgccggtggagaacttctccaccacgaccgggcagccgaccaacgccgtc
tacggcttcacctccatgctgatcaacgtgctgcgcgacgagcggccgacgcacatcgtg
gtcgccttcgacgtgtcccgccgctccttccgcaccgagaggtacgcggagtacaaggcc
ggccgcagcgagacgccgagcgacttcaagggccaggtcagcctggtcaaggaggtcctg
gcggcgttgcgggtgccggtggtggagaaggagggctacgaggcggacgacgtcatcgcc
acgctcgcctgtcaggcccgcgaccagggcatgccggtgctgatcagcaccggtgaccgg
gacgccttccagctcgtcggcgaccaggtcaccgtgctctatccgcgcaagggcgtctcc
gacctggcgcggatggacccggccgcgatcgaggccaagtacggtgtcggcccgcagcgt
taccgcgacctggccgcgctggtcggcgagaccagcgacaacctgcccggtgtcccgggc
gtcggcccgaagaccgccgcgaagtggatcaacacgtacggcggggtggagggtgtgatc
gcccgcgccgacgagatcaagggcaaggccggtgacagtctgcgcgagcggctggccgac
gtgatccgcaactacgagatcaactgtctggtcaccgacctcgacctgccggtgcggccg
gaggacgcccgctggtcggggtgggaccgcgaggcggtgcaccaggtcttcgacaccctc
cagttccgcatcctgcgggaccgcctctaccagtacctcgacgccgtggagccggaggcc
gaggcgggcttcgacctgaccggcgaggtgctggccgcgcccggagcgctggccgggtgg
ctggagacgcacgcgacgcccggcacgcccgtcggcgtcgcggcgaagctggacaccggc
cccaaccgccggcacaccgccgtggtcaccggcatggcgctggccaccggcgacggcgcg
gcggcctggttcgacccgagcacgctggggcaggacgacgagacggccctggcgggttgg
ctggccgacgagaaccggcccaaggtgctgcacgacagcaagccggccgtgctggccttc
ggcgcgcacggctggtccctggccggcatcgcccgggacacccagatcgcggcctacctg
gcccgtccggaccagcggtcgtacgacctgaccgatctggcactgcgctacctgcaccgg
gagctgcgggtcgacgagccggacgacggccagctcacgctggacgggttgggcggtgac
agcgaggccgagcagaacctgatggtgcacgcccgggcgacgctcgacctggccgaggcg
atcgacgccgagctgtcccgcgacggggagcagtcggcgcggctgatggccggggtggaa
ctgccgctgatgcgggtgctggccgccatggagcgcaccgggatcgccgccgacaccggc
tacctctcggagttggaggcgcacttcgccgccgaggtgaaggccgccgcccagggcgcg
tacgcggtggtcgaccgggagttcaacctgggttcgcccaagcagcttcaggagatcctc
ttcggtgaactgaacctgcccaagaccaagaagatcaagaccgggtacaccacggacgcc
gacgccctgcagtggctctacgcgcagaccgagcacccgttgctgcaccacctgctgcgg
caccgggacgtggccaagctcaagtcgaccgtggacggtctgctcaagtcggtctccgac
gacgggcggattcacaccaccttcaaccagaccgtggccgccaccggccggctctcctcc
accgagccgaacctgcagaacatcccgatccgcaccgaggaggggcgccggatccgtcgc
gcgttcgtggtgggcgaggggtacgaatgcctgctcaccgccgactacagccagatcgag
atgcggatcatggcgcacctgtcgacggacgacgcgttgatcgaggcgttcaactccggg
gccgacttccacgccgccaccgcctcgtcggtcttcggggtgccggtcaccgaggtcacg
cctgaccagcggcgcaagatcaaggcgatgaactacggcctggcgtacgggttgagcgcg
ttcggcctgtcccagcagctcggcatcaccgccgaggaggcccggggcctgatggaggac
tacttcgccgggttcggcggtgtccgcgactacctgcaggaggtggtggcgcgggcccgc
caggacggctacacctccaccatcctgggacgccgtcgctacctgccggacctggtcagc
gacaaccggcagcggcgggagatggccgagcggatggccctcaacgcgccgatccagggt
tcggcggcggacatcatcaaggtcgccatgctgcacgtcgacaccgcgttgcgggaggcc
ggcctggggtcccggatgctgttgcaggtgcacgacgagctggtcttcgaggtggcgccg
ggggagcggacggcggtggaggagctggtacgccgcgagatgggtgcggcctatccgctc
tccgtgccgttggaggtgtcggtcggcgagggccgggactggaacagcgccgaccactga
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