Verrucosispora sp. NA02020: HUT12_24670
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Entry
HUT12_24670 CDS
T06958
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ver
Verrucosispora sp. NA02020
Pathway
ver03030
DNA replication
ver03430
Mismatch repair
ver03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUT12_24670
03430 Mismatch repair
HUT12_24670
03440 Homologous recombination
HUT12_24670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ver03032
]
HUT12_24670
03400 DNA repair and recombination proteins [BR:
ver03400
]
HUT12_24670
Enzymes [BR:
ver01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUT12_24670
DNA replication proteins [BR:
ver03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUT12_24670
DNA repair and recombination proteins [BR:
ver03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUT12_24670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
UVR
Motif
Other DBs
NCBI-ProteinID:
QKW15649
UniProt:
A0A7H8KG98
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All DBs
Position
5558133..5559887
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AA seq
584 aa
AA seq
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MAQQEYLQPALAGLDPTVDGVDPALPLYATTFVVVDLETTGGAPDGGGITEIGAVKVRGG
EELGVLGTLVNPGVPIPPFITVLTGITQAMLLPAPPIEQVLPSLLEFVSDAVLVAHNAPY
DVGFLKAACARHGYRWPNPRVLDTAALARRVLLRDEVPNRKLATLAAYFRAGTQPTHRAL
DDARATVDVLHGLIGRLGGHRVDTVGDAIEFSRAVTPTQRRKRHLAEGLPRSPGVYIFRA
ADDRPLYVGTSRDIATRVRSYFTAAEKRARMSEMLAAAERVEAVECAHPLEAEVRELRLI
GAHAPPYNRRSKYPERMVWLKLTDGPYPRLSVVREISPGDRAYLGPFTSRRTAELAAAGF
HDAVPLRQCTHRLSLRTITPACALAELGRCPAPCEHRITPQEYDDRAVQPFATATTGDPQ
PVVDALLARIETLAAAQRYEEAATLRSRLAAVLRATVRMQRLAALSGIAELAAAHPAAGG
GWELALVRHGRLAGAGVSPAGVHPRPTLATIRATAETVSPGHGPVPAATPEESERILSWL
ERPETRLVEMSDSWASPVAGAGRFRDLLEKAESGASHQLWSERS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaggagtacctccagccggcgctggccgggctcgacccgaccgtcgacggc
gtcgacccggcgctgcccctgtacgcgacgacgttcgtggtggtcgacctggagaccacc
ggtggtgccccggacggcggcgggatcaccgagatcggcgcggtcaaggtgcgcggcggc
gaggagctgggggtgttgggcaccctggtcaaccccggagtcccgatcccgccgttcatc
accgtgctgaccggcatcacccaggcgatgctgctgcctgcgccaccgatcgagcaggtg
ctgccgagcctcctggagttcgtctcggacgccgtgctggtggcgcacaacgcgccgtac
gacgtcggtttcctcaaggccgcctgcgcccggcacggctaccgctggccgaacccccgg
gtgctggacaccgccgcactcgcgcgccgggtgctgctgcgcgacgaggtgcccaaccgc
aagctcgccacgctggccgcgtacttccgggccggtacccagccgacccaccgcgcgctg
gacgacgcccgggccaccgtggacgtcctgcacgggctcatcggccggctcggcggccac
cgggtcgacaccgtcggcgacgccatcgagttctcccgcgcggtcaccccgacccagcgc
cgcaaacggcacctcgccgagggcctgccccggtccccgggtgtctacatcttccgggcc
gccgacgaccggcccctctacgtggggacctcccgggacatcgccacccgggtccgcagc
tacttcacggccgccgagaaacgcgcccggatgtcggagatgctggccgccgccgagcgc
gtcgaggcggtggagtgcgcgcacccgctggaggccgaggtccgcgagctgcggctgatc
ggggcgcacgcgccgccgtacaaccgacggtcgaagtacccggagcggatggtctggctg
aagctgaccgacgggccgtacccccggttgtcggtggtccgggagatctcccccggcgac
cgcgcctacctcggcccgttcacctcgcggcgcaccgcggagctggccgccgccggtttc
cacgacgcggtgccgctgcgccagtgcacccaccggctgtcgctgcgcacgatcaccccc
gcctgcgccctggccgagctgggtcgctgcccggcgccctgcgagcaccggatcacccct
caggagtacgacgaccgcgcggtgcagccgttcgccaccgccaccaccggtgacccccaa
ccggtggtggacgccctgctcgcccggatcgagacgctcgccgccgcccagcgctacgag
gaggccgcgacgctgcggtcccggctggccgcggtgctccgggccaccgtgcggatgcag
cggctcgccgcgctgagcgggatcgccgagctggccgccgcccacccggccgccgggggt
ggctgggagctggcgctggtgcggcacggccggctggccggtgccggggtctccccggcc
ggcgtccaccctcgaccgacgctggccacgatccgggccaccgccgagacggtgtcgccc
ggtcacggtccggtcccggcggccaccccggaggagtcggaacggatcctgtcctggttg
gaacgtccggagacccggctggtcgagatgtcggacagttgggcctccccggtggccggc
gcgggccgcttccgggacctgctggagaaggccgagagcggcgcatctcaccaactctgg
tccgaacgctcatga
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