Verrucosispora sp. NA02020: HUT12_31215
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Entry
HUT12_31215 CDS
T06958
Name
(GenBank) alanine racemase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ver
Verrucosispora sp. NA02020
Pathway
ver00300
Lysine biosynthesis
ver00470
D-Amino acid metabolism
ver01100
Metabolic pathways
ver01110
Biosynthesis of secondary metabolites
ver01120
Microbial metabolism in diverse environments
ver01230
Biosynthesis of amino acids
Module
ver_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HUT12_31215
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HUT12_31215
Enzymes [BR:
ver01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HUT12_31215
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
GH3_N_vert
Motif
Other DBs
NCBI-ProteinID:
QKW16769
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Position
6996119..6997375
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AA seq
418 aa
AA seq
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MAELPFETPAYRYDLADVRANHATLRAALPTPSRLYYSLKANPHPAIVATLHRAGCGAEI
CSPGELATALAAGVPGDRMLYTGPGKRDAEVAEAVEAGVRWFSVDSPGALDQADRIARQH
GTTLRCLLRVNDRVANPGQGLTMTGVASQFGADVDWIERQPEAFRSRPAAVVSGFHLYTG
SNVESVDALVTQFASAAATAHRLRDLLGIELELLNLGGGFGAPFARAGRNADLTGLDAQI
RTTLDDLFPGWPDDDPVMAFESGRFLTATAGTLLTRVLDVKHSHGTPVVVLESGINHLGG
MSGLRRLPPLVPALHTDGSTEPADGPALTGAIVAGPLCTPLDTWARAATLPDVRPGDVLS
VPNVGAYGLSASLLAFLGHPAPLEVVCDGEQVVETSRLTLTRTQGTAPADPTDPRDER
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagctgcccttcgagacccccgcgtaccgctacgacctggccgacgtacgcgcc
aaccatgccacgttgcgcgcggccctgcccacgccgagccggctctactactcgctcaag
gccaacccgcacccggcgatcgtggcgaccctgcaccgggccgggtgcggtgccgagatc
tgctcccccggcgaactggccacggcgctggccgccggtgtgcctggtgaccggatgctc
tacaccggtcccggcaagcgcgacgccgaggtggccgaggccgtcgaggcgggcgtgcgc
tggttctcggtcgactcgccgggggcactcgaccaggccgaccggatcgcccgtcagcac
ggcaccacgctgcgctgcctgctgcgggtcaacgaccgggtggcgaatcccggccagggg
ctgaccatgaccggcgtcgcctcgcagttcggcgccgacgtggactggatcgagcgccaa
ccggaggcgttccggtcccggccggcggccgtcgtctccgggttccacctctacaccggc
agcaacgtcgagtcggtggacgcgctggtgacccagttcgcctccgccgccgccaccgcg
caccggctgcgcgacctgctcggcatcgagctggagctgctcaacctgggcggtggcttc
ggcgcgccgttcgcccgcgccgggcgcaacgccgacctgaccgggctcgacgcgcagatt
cgtacgacactggacgatctctttccgggctggccggacgacgacccggtgatggcgttc
gagtccggtcgcttcctcaccgccaccgccgggaccctgctgactcgggtgctggacgtc
aagcactcgcacggcacacccgtggtggtgctggagtccggcatcaaccacctcggcggg
atgtccggcctgcgtcgattgccgccgctggtcccggccctgcacacggacgggtccacc
gaaccggccgacgggccggcgttgaccggggccatcgtcgccggtccgctctgcaccccg
ctggacacctgggcccgcgccgcgacgctgcccgacgtacgccccggtgacgtgctcagc
gtgccgaacgtcggcgcgtacgggctctccgcgagcctgctggccttcctcggccacccg
gcgccgctggaggtcgtctgcgacggcgagcaggtcgtcgagacgtcccggctgacgctg
acccggacgcagggcaccgcaccggccgacccgaccgatccacgagacgaaaggtga
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