Verrucosispora sp. NA02020: HUT12_31600
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Entry
HUT12_31600 CDS
T06958
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ver
Verrucosispora sp. NA02020
Pathway
ver03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUT12_31600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ver03400
]
HUT12_31600
Enzymes [BR:
ver01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HUT12_31600
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HUT12_31600
DNA repair and recombination proteins [BR:
ver03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HUT12_31600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Zn_ribbon_RRN7
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QKW16836
UniProt:
A0A7H8KJP2
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Position
7078400..7079260
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AA seq
286 aa
AA seq
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MPELPEVEALAGYLRQRAVGRRVDRLEVAAISALKTYDPAPSAVVGRTVTDARRHGKFLD
VVFDGGLHLVVHLARAGWLHYREAFASTVPLRPGKGPIALRVRLDDGSGFDLTEAGTQKK
LAAYLVTDPQTVPGVAKLGPDAIAADLSAFAEALRSRRGQVKGVLTDQSVLAGVGNAYSD
EILHAAKLSPFALTDRLSDDQMATLHAATRRVLGDAVTRSLGQRAAELKGEKRSGLKVHA
RTGLPCPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRLSRLVR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactaccggaggtagaggcgctcgcaggctacctgcggcagcgcgcggtgggc
cggcgtgtcgaccggctggaggtcgccgcgatcagcgccctgaagacgtacgatccggcg
ccgagcgcggtcgtcggccggacggtgaccgacgcccggcgacacggcaagttcctcgac
gtcgtcttcgacggcggcctgcacctggtggtacacctggcccgcgcgggctggctgcac
taccgggaggcgttcgcctcgaccgtcccgctccgtcccggaaaggggccgatcgccctc
cgggtacgcctcgacgacggttccggcttcgacctgaccgaggccggtacgcagaagaag
ctcgccgcctacctggtgaccgacccgcagacggtgcccggggtggccaagctcgggccg
gacgcgatcgccgccgacctgagcgccttcgccgaggcgctgcgcagccgccggggccag
gtcaagggggtgctcaccgaccagtccgtgctggccggggtcggtaacgcgtactcggac
gagatcctgcacgccgcgaagctgtcgccgttcgcgctgaccgaccggctgagtgacgac
cagatggcgacgctgcacgcggcgacccggcgggtgctcggcgacgcggtgacccgttcg
ctggggcaacgcgccgcggaactcaagggtgagaagcggtccgggctgaaggtgcacgcc
cgcaccgggctgccctgcccggtctgcggggacaccgtccgggaggtgtcgttcgccgat
tcgagcctccagtactgccccacctgccagaccggcggtaagccgctggctgaccgacgg
ctgtccagacttgtacggtga
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