Verrucosispora sp. TAA-831: ACQVFL_02430
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Entry
ACQVFL_02430 CDS
T11182
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
vet Verrucosispora sp. TAA-831
Brite
KEGG Orthology (KO) [BR:
vet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vet03016
]
ACQVFL_02430
Enzymes [BR:
vet01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ACQVFL_02430
Transfer RNA biogenesis [BR:
vet03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ACQVFL_02430
Prokaryotic type
tRNA splicing ligases
ACQVFL_02430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
XUR91188
LinkDB
All DBs
Position
complement(498461..499660)
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AA seq
399 aa
AA seq
DB search
MNYSTLPGTRAPVRVWTDPHSIEPLAAQQLRNIGALPWVQGVAVMPDVHYGKGATVGSVI
AMRQAVSPAAVGVDIGCGMSAVRTSLTAADLPDDLAGLRHAIEDTIPVGFAQRDAAVDPR
RVRGLEQAGWDAFWRRFNGLHEGVGRLEGRAHSQMGTLGGGNHFVEVCIEQGGADAGRVW
LMLHSGSRNIGKELAERHMAVARTLAHNADLPDRDLAVFLSGTPEMNAYRRDLWWAQEYA
RRNRAVMLALLMNVVRDRFPHVGYDEPISCHHNYVAEETYDGVEVLVTRKGAIRAGAGDL
GIIPGSMGTGSYIVRGRGNADAYCSASHGAGRRMSRGQAKRTFSTADLAAQTAGVECRKD
AGVVDEIPGAYKDITAVMAQQTDLVEVVAHLKQVVCVKG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaactactcgacactgccgggcacccgcgccccggtacgggtctggaccgacccgcac
agcatcgagccgctggccgcccagcagctccgcaacatcggggcgctgccgtgggtgcag
ggcgtcgcggtgatgccggacgtgcactacggcaagggcgccaccgtcggctccgtcatc
gccatgcggcaggccgtctcccccgctgccgtcggcgtagacatcggctgcggcatgtcg
gcggtccgcacctccctgaccgccgccgacctgcccgacgacctcgccgggctgcgccac
gcgatcgaggacacgattccggtcgggttcgcgcagcgcgatgccgcggtggatccgcgt
cgggtccggggcctggagcaggccggctgggatgccttctggcggcgcttcaatggcctc
cacgaaggggtggggcggctggagggtcgggcccacagccagatgggcaccctcggcggc
ggcaaccacttcgtggaggtgtgcatcgagcagggcggtgccgacgccgggcgggtgtgg
ctgatgctgcactccgggtcgcggaacatcggcaaggagctggcggagcggcacatggcc
gtggcccggaccttggcgcacaacgcggacctgcccgaccgggacctggcggtgttcctg
tccggcacgccggagatgaacgcataccggcgggacctgtggtgggcgcaggagtacgcg
cgccgcaaccgggcggtcatgctggcgctgctgatgaacgtggtccgggaccggttcccg
cacgtcggctacgacgagccgatcagttgccaccacaactacgtcgccgaggagacgtac
gacggcgtggaggtgctggtgacccgcaagggcgcgatccgggcaggtgccggtgacctg
ggcatcatccccggctcgatgggcaccggctcgtacatcgtgcgcggcaggggcaacgcc
gacgcgtactgctcggcctcgcacggtgctggccgccggatgtcacgcgggcaggcgaag
aggacgttcagcacggccgacctggcggcccagaccgccggggtggagtgccgtaaggac
gccggggtggtggacgagattcccggcgcgtacaaggacatcaccgccgtgatggcgcag
cagaccgatctggtcgaggtggtcgcacacctcaagcaggtcgtgtgcgtgaagggctag
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