Verrucosispora sp. TAA-831: ACQVFL_07825
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Entry
ACQVFL_07825 CDS
T11182
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
vet Verrucosispora sp. TAA-831
Brite
KEGG Orthology (KO) [BR:
vet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vet03021
]
ACQVFL_07825 (sigB)
Transcription machinery [BR:
vet03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACQVFL_07825 (sigB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
XUR92167
LinkDB
All DBs
Position
complement(1721739..1722749)
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AA seq
336 aa
AA seq
DB search
MALQMMEHRMRAGTEAEHGVDTLTDLDATDERGVSTDLVRAYLNGIGRTKLLTAAEEVDL
AKRIEAGLFAEEKLSTCTPLSADLHADLNVVAQQGRAAKNHLLEANLRLVVSIAKRYTGR
GMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMV
EQVNRMVRARRELSVSLGREPTVAEVARALDVPEFQVIELISYDREPVSLDQAVGQDGES
ALGDFVAAADPAGGPGDTAAQGELRNEVSIVLATLSQREQAVIRLRFGLDDGRQRTLDEV
GREFGLSRERIRQIEKVTLLKLRAPERAQRLEAYAS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcagatgatggagcaccggatgcgcgccggcaccgaggcggagcacggcgtc
gacacccttaccgacctggacgccaccgacgagcgtggcgtctccaccgacctggttcgc
gcgtacctcaacgggatcggccggaccaagctgctcacggcggccgaagaggtggacctg
gcgaagcggatcgaagccgggttgttcgccgaggagaagctgtccacctgcaccccgctc
tcggccgacctgcacgccgacctgaacgtggtcgcgcagcagggccgggccgccaagaac
cacctgctggaggcgaacctgcgcctcgtggtgagcatcgccaagcggtacaccggccgc
ggcatggccttcctcgacctcatccaggaaggcaacctcggcctcatccgcgccgtcgag
aagttcgactacaccaagggctacaagttctccacctacgccacctggtggatccgccag
gccatcacccgcgccatggccgaccaggcccgcaccatccgcatcccggtacacatggtc
gagcaggtcaaccggatggtccgggcccgccgcgagctgtccgtctcgctgggtcgggaa
cccacggtggctgaggtcgcccgcgcgctggacgtacccgagttccaggtgatcgagctg
atctcgtacgaccgggagccggtcagcctggaccaggccgtcggccaggacggggagagc
gcgctgggtgacttcgtcgccgccgccgacccggccggcgggccgggcgacaccgccgcc
cagggcgagttgcgcaacgaggtgagcatcgtgctggccacgctctcccagcgcgagcag
gcggtgatccggctgcggttcgggctcgacgacggccgacagcgcaccctggacgaggtc
ggccgcgagttcggactgtcccgcgagcggatccggcagatcgagaaggtgacgctgctc
aagctgcgggccccggagcgggcgcagcggctggaggcgtacgcctcctga
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