Verrucosispora sp. TAA-831: ACQVFL_09840
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Entry
ACQVFL_09840 CDS
T11182
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vet Verrucosispora sp. TAA-831
Pathway
vet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACQVFL_09840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vet03019
]
ACQVFL_09840
03400 DNA repair and recombination proteins [BR:
vet03400
]
ACQVFL_09840
Enzymes [BR:
vet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACQVFL_09840
Messenger RNA biogenesis [BR:
vet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACQVFL_09840
DNA repair and recombination proteins [BR:
vet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACQVFL_09840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
HRDC
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
XUR92533
LinkDB
All DBs
Position
complement(2172106..2173737)
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AA seq
543 aa
AA seq
DB search
MKLTTHSMSLRRAARSLFGWSSLRPNQLAAMRAVMRRRDALVVLPTGAGKSAIYQIPASL
IPGPTVVISPLLALQQDQIAALNERQRAELRAVRISSDESPAQQAEAIAEIRDGRAEFLF
ITPEQLANPDRLAEVRALRPALVAIDEAHCISAWGHDFRPDYLALGQLIEGIGRPPVVAL
TATASPPVRDDIVARLRLREPEIVVSGLDRPNLFFEVAHCPTEDYRWRRLIALLRDDERP
GIIYVPTRRAAEELADRLTDAGYPSQYYHGGMAATARARLHEAFLADQVPIMVATSAFGM
GIDKPNIAWVVHMALPDSPDSYFQEIGRAGRDGQPARVLLLWQAEDVGLQRFFSGGLPDA
TELRDLAALLRQGPTTKKELREVTGLGPRKLGQYLALLEQVGAAQPRARQRIGAPRYSPT
PVEAAEASVAEAERQQNLTRSRTDMMRAFAETTACRGQTLLAYFGEQMTQICGHCDNCHA
GTSTADDGAVGPFPVHSQVRHPEWGGGLVLSYEDGRMTVLFEEVGYKTLSVSVVSEQGLL
TLD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccacgcactcgatgtcgttgcgccgcgcggcgcgcagcctgttcggctgg
tcctccctgcgccccaaccaactggccgcgatgcgcgcggtgatgcggcggcgcgacgcg
ttggtggtgctgcccaccggcgccggcaagtcggcgatctaccagataccggcgagcctg
atccccggcccgaccgtggtgatctctccgctgctggctctgcaacaggaccagatcgcc
gcgctcaacgagcggcagcgggccgagctgcgggcggtccggatcagctcggacgagtca
ccggcccagcaggccgaggcgatcgccgagatccgcgacggtcgggccgagttcctcttc
atcaccccggagcaactggccaacccggaccggctggccgaggtgcgcgcgttgagaccg
gcgctggtcgcgatcgacgaggcgcactgcatctcggcctggggccacgacttccgcccg
gactacctggcgctcggtcagctcatcgagggcatcggacggccaccggtggtggcgctg
accgccaccgcctccccaccggtacgcgacgacatcgtggcccggctgcggctgcgcgaa
cccgagatcgtggtgtccggtctggaccgaccgaacctcttcttcgaggtggcgcactgc
cccaccgaggactaccggtggcgacggctgatcgcgctgctgcgggacgacgagcgaccg
ggcatcatctacgtacccacccggcgggcggccgaggaactcgccgaccggctcaccgac
gccggatacccgtcgcagtactaccacggcgggatggcggccaccgcccgcgcccggctg
cacgaggcgttcctggccgaccaggtgccgatcatggtggccacgtcggcgttcggcatg
ggcatcgacaagccgaacatcgcctgggtggtgcacatggcgctgcccgactcgccggac
agctacttccaggagatcggccgggccggtcgggacggccagcccgcccgcgtgctgctg
ctctggcaggccgaggacgtggggctgcaacgcttcttcagcggtggcctgcccgacgcc
accgagctgcgcgacctggccgccctgctgcgccagggaccgaccaccaagaaggaactg
cgcgaggtgaccgggctggggccgcgcaagctcgggcagtacctggccctgctggagcag
gtcggtgcggcgcagccgcgcgcccggcagcggatcggcgcgccgcgctactcgccgacg
ccggtggaggccgccgaggcgtcggtggccgaggccgaacggcaacagaacctgacccgc
tcgcggaccgacatgatgcgggccttcgccgagaccaccgcctgccgggggcagaccctg
ctggcctacttcggcgagcagatgacccagatctgcggacactgcgacaactgtcacgcc
ggcaccagcaccgccgacgacggcgcggtgggtccgttcccggtgcacagccaggtgcgg
cacccggagtggggcggcggcctggtgctcagctacgaggacggccggatgacggtgctg
ttcgaggaggtcgggtacaagacgttgtcggtcagcgtggtgtccgaacagggactgctg
acgctggactaa
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