Verrucosispora sp. TAA-831: ACQVFL_10095
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Entry
ACQVFL_10095 CDS
T11182
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vet Verrucosispora sp. TAA-831
Pathway
vet03030
DNA replication
vet03430
Mismatch repair
vet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACQVFL_10095 (dnaE)
03430 Mismatch repair
ACQVFL_10095 (dnaE)
03440 Homologous recombination
ACQVFL_10095 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vet03032
]
ACQVFL_10095 (dnaE)
03400 DNA repair and recombination proteins [BR:
vet03400
]
ACQVFL_10095 (dnaE)
Enzymes [BR:
vet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACQVFL_10095 (dnaE)
DNA replication proteins [BR:
vet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACQVFL_10095 (dnaE)
DNA repair and recombination proteins [BR:
vet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACQVFL_10095 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XUR92578
LinkDB
All DBs
Position
2220177..2223710
Genome browser
AA seq
1177 aa
AA seq
DB search
MGDSFAHLHVHTEYSMLDGAARLKDLFAEVKRQGMPAVAMTDHGNMHGANDFYKQAMAAG
VTPILGIEAYVAPESRYHKKRVRWGRPEQKSDDVSGSGGYTHKTIWARNKTGLHNLFTLT
SKAYTEGYFVKWPRMDAELLAEYADGLMATTGCPSGEVQTRLRLGHDAQALEAAAKYQDI
FGKENYFLELMDHGLDIEKKVRDGLVEIGRKLGIPPVVTNDSHYTHEAQSEAHDVLLCVQ
TGSNVADPNRFKFGGSGYYIKSADEMRDVDRSDVWLEGCRNTLLVAERVDPAGMFEFHNL
MPRFPVPEGETEESWFRKETFAGLGRRYPQGIPEGHVVQAEYELGVIIQMGFPSYFLVVA
DFIQWAKNQGIAVGPGRGSAAGSLVAYALGITDLDPIPHGLIFERFLNPERVSMPDVDID
FDERRRGEVIKYVTDKWGEDKVAQIATFGTIKAKAAIKDSARVLGYPYAVGDRITKAMPP
AVMGKDIPLEGIFDPKHPRYAEAGEIRGMYESEADVKKVIDTARGIEGLIRQTGVHAAGV
IMSAEPIVDHIPLMRRDSDGVIITQFDYPTCESLGLLKMDFLGLRNLTIIDDAVKNIQLN
HGKELDLLALPLDDKAAYELLARGDTLGVFQLDGGPMRSLLRMMKPDNFEDISAVLALYR
PGPMGVDSHTNYALRKNGLQEITPIHPELEEPLREILAPTYGLIVYQEQVQRAAQILAGY
TLGQADLLRRAMGKKKKEILDKEFGPFRDGCREHGYSDEAIQKVWDVLVPFAGYAFNKAH
SAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDDKDKMAMYLSECRRMGIQVLPPDVNTSA
GPFTPVGKEIRFGLGAIRNVGANVVAAIMRCRDEKGEYADFYDFLSKVDAVVCNKKTIES
LIKAGAFDSLKHPRKALLTVHADAIDAYADVKRKEAVGQYDLFGSGFGDTETATTTTVMP
VISDGEWDKRDKLAFEREMLGLYVSDHPLFGLEHVLNAAADCTIATLSEEGTVPDGAVVT
LAGILSGVQRRVTKQGRAWASATLEDLAGGVEALFFPNTYEVIGQYIAEDAIVVVKGRID
RRDDTPRIMAMDMQLPDVSSNPASKPVTLTIPVNRLTPPLADRLKETLLLHPGDTEVHVK
LHRSGRVETWRLGLFRVAPTTALMGDLKSVLGPANVS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgattcgttcgcgcatctgcacgtgcacacggagtattcgatgctcgatggtgcg
gcccgtctcaaggacctgttcgccgaggtcaaacggcaggggatgccggccgtggcgatg
accgaccacggcaacatgcacggcgcgaacgacttctacaagcaggccatggccgccggg
gtcaccccgatcctgggcatcgaggcgtacgtcgcgccggagtcgcgctatcacaagaag
cgggtgcgctggggtcggccggagcagaagagcgacgacgtctcgggtagcggcggttac
acgcacaagacgatctgggcgcgcaacaagaccggcctgcacaacctgttcacgctgacc
agcaaggcgtacaccgagggctacttcgtcaagtggccccggatggacgccgagttgctg
gccgagtacgccgatggcctgatggccaccaccggctgcccctccggcgaggtgcagacc
cggctgcggctgggccacgacgcgcaggcgctcgaagccgccgcgaagtaccaggacatc
ttcggcaaggagaactacttcctggagctgatggaccacggcctggacatcgagaagaag
gtccgggacgggctggtcgagatcggccgcaagctcggtatcccgccggtggtcaccaac
gactcgcactacacgcacgaggcgcagtccgaggcgcacgacgtgctgctctgtgtgcag
accggcagcaacgtcgccgacccgaaccggttcaagttcggcggcagcggctactacatc
aagtccgccgacgagatgcgcgacgtggaccgctccgacgtctggctggagggctgccgc
aacacgctgctggtggccgagcgggtcgacccggccgggatgttcgagttccacaacctg
atgccgcgcttcccggtgcccgagggcgagaccgaggagtcgtggttccgcaaggagacc
ttcgccggcctgggccgccgctacccgcagggcatccccgagggccatgtcgtgcaggcc
gagtacgagctgggcgtcatcatccagatgggcttcccgtcgtacttcctcgtggtggcc
gacttcatccagtgggccaagaaccagggcatcgcggtcggccccggacggggttcggcg
gccggttcgctggtcgcgtacgcgttgggcatcaccgacctggacccgatcccgcacggg
ctgatcttcgagcgcttcctcaaccccgagcgcgtctccatgcccgacgtcgacatcgac
ttcgacgagcgtcggcgcggtgaggtgatcaagtacgtcaccgacaagtggggtgaggac
aaggtcgcccagatcgccaccttcggcaccatcaaggcgaaggccgcgatcaaggactcg
gcgcgggtgctcggctacccgtacgcggtcggtgaccggatcaccaaggccatgccaccg
gccgtgatgggcaaggacatcccgctcgaaggcatcttcgacccgaagcacccccggtac
gccgaggccggcgagatccgcggcatgtacgagtccgaggccgacgtcaagaaggtcatc
gacaccgcccggggcatcgagggtctgatccggcagaccggggtgcacgccgccggcgtg
atcatgtccgccgagccgatcgtcgaccacatcccgctgatgcgccgggactccgacggg
gtcatcatcacccagttcgactacccgacgtgcgagtcgctcgggctgttgaagatggac
ttcctcggcctgcggaacctgaccatcatcgacgacgcggtcaagaacatccagctcaac
cacggcaaggaactggacctgctggccctgccgctggacgacaaggccgcgtacgagctg
ctggcccggggcgacaccctgggcgtgttccagctcgacggcgggccgatgcggtcactg
ctgcggatgatgaagccggacaacttcgaggacatctcggcggtcctggcgctgtaccgt
cccggcccgatgggcgtggactcgcacaccaactacgcgctgcgcaagaacggcctccag
gagatcaccccgatccacccggagctggaggagccgctgcgggagatcctcgcccccacc
tacggcctgatcgtctatcaggagcaggtgcagcgcgccgcccagatcctcgccggctac
acgctcggccaggccgacctgctgcgccgggcgatgggcaagaagaagaaggagatcctc
gacaaggagttcggcccgttccgggacggctgccgcgaacacggctactccgacgaggcc
atccagaaggtctgggacgtgctggtcccgttcgccgggtacgccttcaacaaggcgcac
tcggccgcgtacgggctggtgtcgtactggaccgcgtacctgaaggcgcactacccggcc
gagtacatggcggcgttgctgacctccgtcggcgacgacaaggacaagatggccatgtac
ctgtccgagtgccgccggatgggcatccaggtgctgccgccggacgtgaacacctccgcc
gggccgttcaccccggtcggcaaggagatccgcttcggtctcggcgcgatccgcaacgtc
ggcgccaacgtggtggcggcgatcatgcggtgccgcgacgagaagggcgagtacgccgac
ttctacgacttcctgtccaaggtggacgcggtggtctgcaacaagaagaccatcgaatcg
ctgatcaaggccggggcgttcgactcgctcaagcacccgcgcaaggcgctgctcaccgtg
cacgccgacgccatcgacgcgtacgccgacgtcaaacgcaaggaggccgtcggccagtac
gacctcttcggttcgggcttcggcgacaccgagaccgcgaccaccacgacggtcatgccc
gtcatcagcgacggcgagtgggacaagcgcgacaagctcgcgttcgaacgcgagatgctc
ggcctgtacgtctccgaccacccgctgttcggtctggagcacgtgctgaacgcggcggcc
gactgcaccatcgccaccctgtccgaggagggcaccgtgcccgacggcgcggtggtcacg
ctcgccggcatcctctccggcgtgcagcggcgggtcaccaagcagggccgggcgtgggcc
tcggcgaccctggaggatctcgccggtggggtggaggcgctgttcttcccgaacacctac
gaggtgatcgggcagtacatcgccgaggacgccatcgtggtggtcaagggccggatcgac
cggcgcgacgacaccccgcgcatcatggcgatggacatgcaactgccggacgtcagcagc
aacccggcgagcaaaccggtcaccctgacgatcccggtcaaccgactcacgccaccgctc
gccgaccggctcaaggagaccctgctgctgcatcccggcgacaccgaggtgcacgtgaag
ctgcaccgcagcggccgggtcgagacctggcgactgggcctgttccgcgtcgcccccacc
accgccctgatgggtgacctcaagagcgtgctcggtcccgccaacgtgagctga
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integrated database retrieval system
