Verrucosispora sp. TAA-831: ACQVFL_22560
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Entry
ACQVFL_22560 CDS
T11182
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vet Verrucosispora sp. TAA-831
Pathway
vet03030
DNA replication
vet03430
Mismatch repair
vet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACQVFL_22560
03430 Mismatch repair
ACQVFL_22560
03440 Homologous recombination
ACQVFL_22560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vet03032
]
ACQVFL_22560
03400 DNA repair and recombination proteins [BR:
vet03400
]
ACQVFL_22560
Enzymes [BR:
vet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACQVFL_22560
DNA replication proteins [BR:
vet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACQVFL_22560
DNA repair and recombination proteins [BR:
vet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACQVFL_22560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
UVR
Motif
Other DBs
NCBI-ProteinID:
XUR89171
LinkDB
All DBs
Position
5104882..5106636
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AA seq
584 aa
AA seq
DB search
MAQQEYLQPALAGLDPTVDGVDPALPLYATTFVVVDLETTGGAPDGGGITEIGAVKVRGG
EELGVLGTLVNPGVPIPPFITVLTGITQAMLLPAPPIEQVLPSFLEFVADAVLVAHNAPY
DVGFLKAACARHGYRWPNPRVLDTAALARRVLLRDEVPNRKLATLAAYFRAGTQPTHRAL
DDARATVDVLHGLIGRLGGHRVDTVGDAIEFSRAVTPTQRRKRHLAEGLPRSPGVYIFRA
ADDRPLYVGTSRDIATRVRSYFTAAEKRARMSEMLAAAERVEAVECAHSLEAEVRELRLI
GAHAPPYNRRSKFPERMVWLKLTDGPYPRLSVVRAISPDDRAYLGPFTSRRTAELAAAGF
HDAVPLRQCTHRLSLRTITPACALAELGRCPAPCEHRITPEEYDDRAVRPFATATTGDPQ
PVVDALLARIETLAAAQRYEEAATLRSRLAAVLRATVRMQRLAALSGIAELAAAHPAAGG
GWELALVRHGRLAGAGVSPAGLHPRPTLTAIRATAETVSPGHGPVPAATPEESERILSWL
ERPETRLVEMSDGWASPVAGAGRFRDLLEKAESGASHQLWSERS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaggagtatctccagccggcgctggccgggctcgacccgaccgtcgacggt
gtcgacccggcgctgcccctgtacgcgacgacgttcgtggtggtcgacctggagaccacc
ggtggcgccccggacggcggcgggatcaccgagatcggcgcggtgaaggtgcgcggcggc
gaggagctgggggtgctgggcaccctggtcaatcccggggtgccgatcccgccgttcatc
accgtgctgaccggcatcacccaggcgatgctgctgccggcgccaccgatcgagcaggtg
ctgccgagcttcctggagttcgtcgcggacgccgtgctggtggcgcacaacgcgccgtac
gacgtcgggttcctcaaggccgcctgtgcccggcacggctaccgctggcccaatccccgg
gtgctggacaccgccgcgctggcccgccgggtgctgctgcgtgacgaggtgcccaaccgc
aagctcgccacgctggccgcgtacttccgggccggcacccagccgacccaccgcgcactg
gacgacgcccgggccaccgtggacgtcctgcacgggctcatcggccggctcggcggtcac
cgggtggacaccgtcggcgacgccatcgagttctcccgcgcggtcaccccgacccaacgc
cgcaagcggcacctcgccgagggcctgccccgttcccccggcgtctacatcttccgggcc
gccgacgaccggcccctctacgtgggcacctcccgggacatcgccacccgggtccgcagc
tacttcaccgccgccgagaaacgcgcccggatgtcggagatgctggccgccgccgagcgc
gtcgaggcggtcgagtgcgcgcactcgctggaggccgaggtccgcgagctgcggctgatc
ggggcgcacgcgccgccgtacaaccggcggtcgaagttcccggagcggatggtctggctg
aagctgaccgacgggccgtatccccggttgtcggtggtccgggcgatctcccccgacgac
cgcgcctacctcggcccgttcacctcgcggcgcaccgcggagctggccgccgccggtttc
cacgacgcggtgccgctgcgccagtgcacccaccgactgtcgctgcgcacgatcaccccg
gcctgcgccctggccgagctgggtcgctgcccggcgccctgcgagcaccggatcaccccc
gaggagtacgacgaccgcgcggtgcggccgttcgccaccgccaccaccggtgacccgcag
ccggtggtggacgccctgctcgcccggatcgagacgctcgccgccgcccagcgctacgag
gaggccgccacgctgcggtcccggctggccgcggtgctgcgggccaccgtccgcatgcag
cggctcgccgcgctgagcgggatcgccgagttggccgccgcccacccggccgccggaggt
ggctgggagctggcgctggtgcggcacggccgactggccggtgccggggtctcccccgcc
gggctccacccccgaccgacgctgaccgcgatccgggccaccgccgagacggtgtcgccc
ggtcacggtccggtcccggcggccaccccggaggagtccgaacggatcctgtcctggttg
gagcgaccggagacccggctggtcgagatgtcggacggatgggcctccccggtggccggc
gcaggccgcttccgcgacctgctggagaaggccgagagcggcgcatctcaccaactctgg
tccgaacgctcatga
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