Verrucosispora sp. TAA-831: ACQVFL_26080
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Entry
ACQVFL_26080 CDS
T11182
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vet Verrucosispora sp. TAA-831
Pathway
vet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACQVFL_26080 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vet03019
]
ACQVFL_26080 (groL)
03110 Chaperones and folding catalysts [BR:
vet03110
]
ACQVFL_26080 (groL)
03029 Mitochondrial biogenesis [BR:
vet03029
]
ACQVFL_26080 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vet04147
]
ACQVFL_26080 (groL)
Enzymes [BR:
vet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ACQVFL_26080 (groL)
Messenger RNA biogenesis [BR:
vet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ACQVFL_26080 (groL)
Chaperones and folding catalysts [BR:
vet03110
]
Heat shock proteins
HSP60 / Chaperonin
ACQVFL_26080 (groL)
Mitochondrial biogenesis [BR:
vet03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ACQVFL_26080 (groL)
Exosome [BR:
vet04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ACQVFL_26080 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ACQVFL_26080 (groL)
Exosomal proteins of breast cancer cells
ACQVFL_26080 (groL)
Exosomal proteins of colorectal cancer cells
ACQVFL_26080 (groL)
Exosomal proteins of bladder cancer cells
ACQVFL_26080 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
UreE_C
Motif
Other DBs
NCBI-ProteinID:
XUR89794
LinkDB
All DBs
Position
complement(5877123..5878772)
Genome browser
AA seq
549 aa
AA seq
DB search
MAKILSFSDDARHLLEHGVNALADAVKVTLGPRGRNVVLDKKFGAPTITNDGVTIAKEIE
LTNPYENLGAQLVKEVATKTNDVAGDGTTTATVLAQAMVREGLRNVTAGTNPAGLKRGID
AASAKVSEALLGKAVEVSDKKAVAHVATVSAQDSTIGELIAEAMERVGRDGVITVEEGSA
LHTELDVTEGLQFDKGFISPNFVTDVESQESVLEDAYILITTQKISAIEELLPLLEKVLQ
NNKPLLIIAEDVEGQALSTLVVNAIRKTLKVCAVKAPGFGDRRKAMLQDMAVLTGAELVA
PELGYKLDQVGLEVLGTARRIVVDKENTTIVDGGGQATEVTDRVAQIRKEIEASDSEWDR
EKLAERLAKLSGGIAVVKVGAATEVEMKERKHRIEDAIAATKAAVEEGTVPGGGAALAQI
LPVLDDDLGFTGDEKVGVSIVRKALVEPLRWIAQNAGHDGYVVVQRVVAAEWGTGLDAAT
DEYVDLAKAGIIDPVKVTRNAVTNAASIAGLLLTTESLVVEKPKEPEPAAGGHGHGHGHG
HGHQHGPGF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgagcttctcggacgacgcccggcacctgctggagcacggtgtcaac
gcgctcgcggacgcggtcaaggtcaccctcgggccgcgcgggcgcaacgtcgtcctggac
aagaaattcggtgcgccgacgatcaccaacgatggtgtgaccatcgccaaggagatcgag
ctcaccaacccgtacgagaacctcggtgcgcagttggtcaaggaggtggcgaccaagacc
aacgacgtcgccggcgacgggaccaccaccgcgaccgtgctggcccaggccatggtccgc
gagggtctgcgcaacgtcaccgcgggtaccaacccggccggtctcaagcggggcatcgac
gcggcctccgcgaaggtctccgaggcgctgctcggcaaggccgtcgaggtctccgacaag
aaggccgtggcgcacgtggcgacggtctccgcgcaggactccaccatcggtgagctgatc
gccgaggcgatggagcgggtcggccgcgacggtgtgatcaccgtcgaggagggctccgcc
ctgcacaccgagctggacgtgaccgagggtctccagttcgacaagggcttcatctcgccg
aacttcgtcaccgacgtggagtcgcaggagtccgtcctggaggacgcgtacatcctgatc
accacgcagaagatctcggcgatcgaggagctgctgccgctgctggagaaggtcctccag
aacaacaagccgctgctgatcatcgccgaggacgtcgagggtcaggccctgtccaccctg
gtggtcaacgcgatccgcaagaccctcaaggtctgcgcggtcaaggcgcccggcttcggc
gaccgccgcaaggcgatgctccaggacatggcggtcctgaccggtgccgagctggtcgcg
cccgagctgggctacaagctcgaccaggtcggcctggaggtgctgggcaccgcccggcgc
atcgtggtcgacaaggagaacaccacgatcgtcgacggtggcgggcaggccaccgaggtc
accgaccgggtcgcgcagatccgcaaggagatcgaggcctcggactccgagtgggaccgg
gagaagctcgccgagcggctggccaagctctccggcggcatcgcggtggtcaaggtcggc
gcggccaccgaggtcgagatgaaggagcgcaagcaccgcattgaggacgccatcgccgcg
accaaggcagcggtcgaggagggtacggtccccggtggcggtgccgccctggcccagatc
ctgccggtgctcgacgacgacctgggcttcaccggtgacgagaaggtcggcgtctcgatc
gtgcgcaaggcgctcgtcgagccgctgcggtggatcgcccagaacgccggccacgacggg
tacgtggtggtgcagagggtcgtcgccgccgagtggggcaccggcctggacgccgccacc
gacgagtacgtcgacctggccaaggccggcatcatcgacccggtcaaggtgacccgtaac
gccgtcaccaacgccgcgtcgatcgccggtctgctgctcaccaccgagagcctcgtggtg
gagaagccgaaggagccggagcccgccgcgggcggtcacggtcacggtcacggccacggt
cacggccaccagcacggcccgggtttctga
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integrated database retrieval system
