Verrucosispora sp. TAA-831: ACQVFL_26570
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Entry
ACQVFL_26570 CDS
T11182
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
vet Verrucosispora sp. TAA-831
Pathway
vet03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACQVFL_26570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vet03021
]
ACQVFL_26570
03400 DNA repair and recombination proteins [BR:
vet03400
]
ACQVFL_26570
Enzymes [BR:
vet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACQVFL_26570
Transcription machinery [BR:
vet03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACQVFL_26570
DNA repair and recombination proteins [BR:
vet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACQVFL_26570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
XUR93960
LinkDB
All DBs
Position
complement(5970594..5974481)
Genome browser
AA seq
1295 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPQRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFASYVVTSVDAEARHRDLSTIENEILAEKRQSENSRDSEIEKRAAKLEAD
LAELEAEGAKADVRRKVKEGGEREMRQIRDRAQREIDRLDEVLDTFRKLDSKQLVTDELL
YRELRDRFGEYFTGGMGAEAIKALVQNMDLEAEAENLRETIRTGKGQRKIRALKRLKVVA
AFQNTRNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPKLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PVVWDVLEEVIGEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGKPVTMPTQDMVIGLYHLTHLTTGERGEGR
AFSSDAEARMAYDNGELHLQAPVKIRLRDVVEVDNGAGGQPWTAPEGWVPGEPLSVETTL
GRVLFNETLPQGYRFVNYEIRKGQLSAIVNDLAERFPKVALAATLDGLKEAGFHWATWSG
VTIGMEDVIAPPRKREILERYEKEADRIDKQYQRGLMTAEERRGELIEIWTKATNEVAKE
MDTALPQENPLWKMINSGARGNLLQLRQIAAIRGLVANPKGEIIPRPIKASYREGLSVLE
YFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRAIPMQVGQQLDGR
LVVHEHAETSVHARTLADDIKGPDGTVVAERGADINSILVDKIVAAGVDGVRVRSVLTCE
SKLGVCGACYGRSLPTGKIVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITQGL
PRVQEIFEARIPKGKAPIADTPGRIRIEDGERSRKIVVIPDDGSDEIVYDKISKRVRLRA
HDGDHVEVGEKLTEGTIDPHELLRILGPRAVQVHLTQEVQEVYRSQGVLIHDKHIEIIIR
QMLKRVTVIDSGSTEFLPGVLVDRALFESENRRLVGEGGEPAAGRPVLMGITKASLATDS
WLSAASFQETTRVLTDAAIHARSDSLIGLKENVIIGKLIPAGTGISKYRNVRVEPTEEAK
AKVYSMTGYPETDYGFGPASGQAVPLDDFDFGSYR
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaactttttcgacgagttgcgaattgggctggcgaccgccgacgacatc
cgtcagtggtcgcacggcgaggtcaagaagcccgagacgatcaactaccgcaccctcaag
ccggagaaggacgggctcttctgcgagaagatcttcggtccgcagcgggactgggagtgc
tactgcggcaagtacaagcgggtccggttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgctcgaaggtccgccgtgagcggatgggccacatcgagctcgccgcgccg
gtgacccacatctggtacttcaagggcgtgccgagccggctgggttacctgctggacctc
gccccgaaggacctcgagaagatcatttacttcgcctcgtacgtcgtgacgagcgtcgac
gccgaagcgcgtcaccgcgacctctcgaccatcgagaacgagatcctggccgagaagcgg
cagtcggagaacagccgcgactcggagatcgagaagcgggccgccaagctcgaggccgac
ctggccgagctggaggcggagggcgcgaaggcggacgtccggcgcaaggtcaaggagggc
ggagagcgcgagatgcgccagatccgcgaccgggcccagcgcgagatcgaccgcctggac
gaggtgctggacaccttccgcaagctggactcgaagcagttggtcaccgacgagttgctc
taccgtgagctgcgcgaccggttcggcgagtacttcaccgggggcatgggcgccgaggcg
atcaaggccctggtgcagaacatggaccttgaggccgaggcggagaacctgcgggagacc
atccgcaccggtaagggtcagcggaagatccgggcgctcaagcggctcaaggtcgtcgcg
gcgttccagaacacccgcaactcgccgctcggcatggtgctcgactgcgtaccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgcgaccagcgacctg
aacgacctgtaccgccgcgtgatcaaccggaacaaccggctcaagcggctgatcgacctc
ggtgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccggccggtcaccggcccgggtaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggtcggttccgtcagaacctgctgggcaag
cgcgtcgactactccggccgttcggtcatcgtggtcggcccgaagctcaagctgcaccag
tgtggtctgcccaagcagatggcgctggagctgttcaagccgttcgtgatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaaatccgccaagcggatggtcgagcggcagcgc
ccggtcgtgtgggacgtgctggaagaggtcatcggcgagcacccggtgctgctcaaccgg
gcgcccaccctgcaccgactcggcatccaggccttcgagccgcagttggtcgagggcaag
gccatccagatccacccgctggtctgcaccgcgttcaacgccgacttcgacggtgaccag
atggcggtgcacgtgccgctgtccgccgaggcccaggccgaggcgcggatcctgatgctg
tcgtcgaacaacatcctcaagccggccgacggcaagccggtcaccatgcccacccaggac
atggtcatcgggctctaccacctgacccacctcaccaccggtgagcgcggggagggccgg
gcgttcagctcggacgccgaggcgcggatggcgtacgacaacggcgagctgcacctgcag
gcgccggtcaagatccggctgcgggacgtggtcgaggtggacaacggcgccggtgggcag
ccgtggaccgcgcccgagggctgggttcccggtgagccgctgagcgtggagaccacgctc
ggccgggtgctgttcaacgagaccctgccgcagggctaccggttcgtgaactacgagatc
cgcaagggtcagctctccgcgatcgtcaacgacctcgccgagcggttcccgaaggtggcc
ctggcggccaccctggacgggctcaaggaggccggtttccactgggccacctggtccggc
gtgaccatcggcatggaggacgtcatcgctccgccgcgcaagcgggagatcctggagcgg
tacgagaaggaagccgaccggatcgacaagcagtaccagcgtggtctgatgaccgccgag
gagcgtcgcggcgagctcatcgagatctggaccaaggcgaccaacgaggtcgccaaggag
atggacaccgcgctgccgcaggagaacccgctgtggaagatgatcaactcgggtgctcgc
ggtaacctgctccagctccggcagatcgcggcgatccgtggtctggtggccaaccccaag
ggcgagatcatcccgcggccgatcaaggccagctaccgggagggtctgtccgtgctggag
tacttcatctccacgcacggtgcccgtaagggtctcgcggacaccgccctgcgtaccgcc
gactcgggttacctgacccggcgtctggtggacgtctcgcaggacgtcatcatccgcgag
gaggactgcggcaccgaccgggccatcccgatgcaggtcggtcagcagctcgacggccgg
ctggtggtgcacgagcacgccgagacgagcgtgcacgcccgtaccctcgccgacgacatc
aaggggccggacggcaccgtcgtcgccgagcgtggcgcggacatcaactcgatcctggtc
gacaagatcgtcgccgccggggtggacggtgtccgggtccgcagcgtgctcacctgcgag
tcgaagctgggcgtctgcggtgcgtgctacggccgctcgctgccgaccggcaagatcgtg
gacgtcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccgggtacccag
ctgacgatgcgtaccttccacactggtggtgtcgcgggtgaggacatcactcagggtctg
ccgcgtgtgcaggagatcttcgaggcccggattccgaagggcaaggcgccgatcgccgac
acccccggccggatccggatcgaggacggcgagcggtcgcgcaagatcgtcgtgatcccg
gacgacggcagcgacgagatcgtgtacgacaagatctcgaagcgggtccggctgcgggcg
cacgacggcgaccacgtcgaggtcggcgagaagctcaccgagggcaccatcgacccgcac
gagctgctgcgcatcctcggcccgcgtgcggtccaggtccacctgacccaggaggtccag
gaggtctaccgctcgcagggtgtgctcatccacgacaagcacatcgagatcatcatccgc
cagatgctcaagcgggtgacggtcatcgactccggctcgaccgagttcctgccgggtgtg
ctggtcgaccgggcgctgttcgagtcggagaaccgccggctcgtcggcgagggcggcgag
cccgcagccggacgtccggtgctgatgggtatcaccaaggcctcgctggccaccgactcc
tggctctcggcggcctccttccaggagaccacccgggtgctgaccgacgcggcgatccac
gcccgcagcgactcgctgatcggtcttaaggagaacgtgatcatcggtaagctcatcccg
gccggtaccggcatcagcaagtaccgcaacgtccgggtcgagccgaccgaggaggcgaag
gccaaggtctactcgatgaccggctacccggagaccgactacggtttcgggccggccagt
ggccaggctgttccgctggacgacttcgacttcgggtcgtaccgctag
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