Verrucosispora sp. TAA-831: ACQVFL_30345
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Entry
ACQVFL_30345 CDS
T11182
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
vet Verrucosispora sp. TAA-831
Brite
KEGG Orthology (KO) [BR:
vet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vet03032
]
ACQVFL_30345 (gyrB)
03400 DNA repair and recombination proteins [BR:
vet03400
]
ACQVFL_30345 (gyrB)
Enzymes [BR:
vet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ACQVFL_30345 (gyrB)
DNA replication proteins [BR:
vet03032
]
Prokaryotic type
DNA Topoisomerases
ACQVFL_30345 (gyrB)
DNA repair and recombination proteins [BR:
vet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACQVFL_30345 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
DotD
Motif
Other DBs
NCBI-ProteinID:
XUR90569
LinkDB
All DBs
Position
6820550..6822496
Genome browser
AA seq
648 aa
AA seq
DB search
MAAQDNQQYGAESITVLEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNAVDEALAGHCD
TIDVVLLADGGVRVTDNGRGFPVDLHPKLKKPGVEVALTVLHAGGKFDGKAYAVSGGLHG
VGVSVVNALSTKMAVEIHKDGFVWRQQYHHSKPTTLEKGEPTDTTGSAVSFWPDPDVFET
VDFDFQTIYRRLQEMAFLTRGLKIHLLDERVAEGEEGKLREVTFQYEGGIADFVRHLNAS
KSPMHKTVIEFGAEEEGMSLEIAMQWNESYGESVYTFANNINTHEGGTHEEGFRAALTSV
VNRYGADKKLLKGDEKLSGEDIREGLAAIISVKLTNPQFEGQTKTKLGNTPVKSFVQRVC
NDRLVDWLDRNPAEAKIIITKASQAARARIAAQQARKLARRKSLLESGSMPGKLADCQST
DPRESEVFIVEGDSAGGSAKQGRDPRTQAILPIRGKILNVEKARIDRVLKNNEVQALITA
LGTGIHDDFDMEKLRYHKVVLMADADVDGQHIQTLLLTLLFRFMRPLVELGHVYLAAPPL
YKIKWNKKGDDAQYAYSDRERDGLIALRQQKKPNAKPDDIQRFKGLGEMNYPELWETTMN
PATRTLRQVTLDDAATADELFSVLMGEDVEARRSFIQRNAKDVRFLDI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgcaggacaatcagcagtacggcgccgagtcgatcaccgtcctcgaaggtctg
gaggcggtccgtaagcggcccggtatgtacatcgggtccaccggcgaacggggcctgcac
cacctcgtgtgggaggtcgtcgacaacgcggtggacgaggcgctggccggtcactgcgac
acgatcgacgtggtgctgctcgccgacggaggcgtacgggtcaccgacaacgggcgtggc
ttcccggtcgacctgcaccccaaactgaagaagccgggcgtcgaggtggcgctgaccgtg
ctgcacgccggcggcaagttcgacggcaaggcgtacgccgtctccggcggcctgcacggc
gtcggcgtctcggtcgtcaacgccctctccaccaagatggcggtggagatccacaaggac
ggtttcgtctggcgtcagcagtaccaccactccaagcccaccaccctggagaagggcgag
ccgaccgacaccaccggctcggcggtctccttctggcccgaccccgacgtcttcgagacg
gtcgacttcgacttccagaccatctaccgccgcctccaggagatggcgttcctgacccgt
ggcctcaagatccacctgctcgacgagcgggtcgccgagggcgaggagggcaagctccgc
gaggtgaccttccagtacgagggcggcatcgccgacttcgtccggcaccttaacgcctcg
aagagcccgatgcacaagacggtgatcgagttcggtgccgaggaagagggcatgtccctt
gagatcgccatgcagtggaacgagtcgtacggcgaatcggtctacaccttcgccaacaac
atcaatacccacgagggcggcacccacgaggagggcttccgggccgcgctgaccagcgtg
gtcaaccgctacggtgcggacaagaagctgctcaagggcgacgagaagctctccggcgag
gacatccgcgagggcctcgcggcgatcatctcggtcaagctgaccaacccgcagttcgag
ggtcagaccaagaccaagctcggcaacaccccggtgaagagcttcgtccagcgggtctgc
aacgaccggctggtcgactggctggaccgcaacccggccgaagcgaagatcatcatcacc
aaggcgtcccaggccgcccgcgcccggatcgccgcccagcaggcgcgcaagctggcccga
cgcaagtcgctgctggagtccggctcgatgccgggcaagctggccgactgccagtccacc
gacccgcgcgagtccgaggtgttcatcgtcgagggcgactcggcgggcggctcggccaag
cagggccgggacccgcgtacccaggcgatcctgccgatccgcggcaagatcctcaacgtg
gagaaggcccggatcgaccgggtgctcaagaacaacgaggtgcaggcgctgatcaccgcg
ctgggcaccggcatccacgacgacttcgacatggagaagctgcgctaccacaaggtggtg
ctgatggccgacgccgacgtcgacggtcagcacatccagacgctgctgctcaccctcctg
ttccgcttcatgcggccactggtcgagctcggtcacgtctacctcgccgccccgccgctc
tacaagatcaagtggaacaagaagggcgacgacgcgcagtacgcgtactccgaccgggag
cgcgacgggctgatcgcgctgcgtcagcagaagaagccgaacgccaagccggacgacatc
cagcggttcaagggcctcggcgagatgaactacccggagctgtgggagaccacgatgaac
ccggcgacccggacgctgcgtcaggtcaccctggacgacgccgccaccgccgacgagctg
ttcagcgtgctgatgggcgaggacgtcgaggcccgccgctcgttcatccagcgcaacgcc
aaggacgtccgcttcctggacatctga
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