Vibrio europaeus: IXK98_01865
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Entry
IXK98_01865 CDS
T07114
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
veu
Vibrio europaeus
Pathway
veu05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IXK98_01865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
veu03000
]
IXK98_01865
Transcription factors [BR:
veu03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
IXK98_01865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VpsT-like_REC
GerE
Sigma70_r4_2
DUF8040
Sigma70_r4
HTH_23
DUF6746
HTH_38
HTH_24
HTH_40
HTH_30
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QPG34497
LinkDB
All DBs
Position
2:complement(390020..390688)
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AA seq
222 aa
AA seq
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MMNNDIYKITLVSDVTMQSKLLKDSLEKGLDLQVTMVTSEALEEMEEGSSLLGNLVLIDY
HYLDESKFEAYNQAKMVSQYTVKEIVFNCPNEAPSSHLFKWRNLVGVFYVDDEVSLLLKG
MEKIMNDEMWLSRKVAQDYIEHFRCTNTVTTSQAYANLTKREKEIMRLLGHGASNIQIAE
ELFVSENTVKTHLHNIFKKINAKNRLQALLWANNNIALEERV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgatgaataatgatatttataaaattactcttgtttctgatgtcactatgcaatcgaaa
ctgctgaaagattctttggaaaaagggctggatctccaagtaaccatggttacttctgag
gcgctagaagaaatggaagaggggagttcattacttggcaatcttgttcttatcgattac
cactatttggatgaaagtaagtttgaagcgtacaaccaagccaaaatggttagccaatac
acagtcaaagaaattgtgtttaactgccccaatgaagcgccttcaagccatctgtttaag
tggcgtaatctagtcggagttttctacgttgatgatgaggtttcattactgctcaaaggt
atggaaaagatcatgaatgatgaaatgtggctatcacgtaaagtcgctcaagattatatc
gagcatttccgttgcacgaatacggttacaacttcccaagcctatgcaaatctaactaag
cgcgagaaagaaatcatgcgtttgctcgggcacggtgcatccaatattcaaattgcggaa
gagttgtttgtcagtgaaaacacggtgaaaacgcatttacacaatatttttaagaaaatt
aatgccaagaaccgactccaagcgctgctttgggcaaacaataacattgctctagaagag
cgggtttag
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