Vibrio europaeus: IXK98_07115
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Entry
IXK98_07115 CDS
T07114
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
veu
Vibrio europaeus
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
veu03400
]
IXK98_07115
DNA repair and recombination proteins [BR:
veu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IXK98_07115
Archaeal homologous recombinant proteins
IXK98_07115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
SMC_N
CdvA
nSTAND_NTPase5
HTH_34
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QPG33883
LinkDB
All DBs
Position
2:1536566..1539613
Genome browser
AA seq
1015 aa
AA seq
DB search
MKPIKLTMQAFGPFAKTEQIEFNHLGLNPLFLINGPTGSGKTSILDAICFALYGETTGNE
RQGNQMRCDQAAANLLTEVTLEFSLNGKHYRVTRAPEQEAPKARGEGLTTRKHTASLYEI
TNDEVLITSKTAQVKNEVANLLGLNETQFRQVMVLPQGKFRELLLASSKEREAIFGQLFQ
TDVYKKIEFALKDKASAISKAKDEFDNQIRGALQVAEVSTEQELQERLIHSRSELEQAKS
VEAKESEALNIVKSELNKAKSLNELFNKRASTVAAQQSHLKNKAQITELESKLKLAKSAS
HLEVAYANMQSSAKQVVGLETKLEALQAQHLAAEKASQHEEQVLKSADENAQQIPMLTEA
LFKLDKVKAKLIEKVELEKSISALNTTRIDYDKKLIQYNELRQQLQKEAESGASALEQAR
KDLTEKSNLETGLLSNQRLLDDLNKLAAQTAELARLQQKLVPIIEQVEKAKKDVAEKQKY
ADEQELSWHNSQAALLAQKLEKGSPCPVCGSQEHPVPAMFQGEPVSKESVQAARQKERSA
IDELNRQTNILEQQQATIVAQDKHIKELQRELGEGAAMSLEQLQQEIAQQKARLNILAAI
DLDKMEKTVQELTQRCANGEAKINELKSSISANDSALDVQNQQLEKVSSGIDRQYTSVEV
VERQYLAQKANISQLAQTLEKAQQSAKQAKLALVAIDTERSSTTQLLEDGKVHNQQADKE
WQSQLELSAIDSKQQFLQARIEPQLYDQWQAQINEYVQTATQLEQSVKDLNEQLNDIEKP
DLDKKQTELDAAEIKYRECRGSLDTVHSLTERLEKVQKDINSLHDKNQRLEAEYKVYGTL
YDVASGKTGSRVSLHRFVLGVLLDDVLIQASQRLNMMSKGRYQLVRKTEGFKGAAGRGLD
LSVEDGYTGKTRDVATLSGGESFMAALALALGLSDVVQSYSGGIKLDTLFIDEGFGSLDP
ESLDLAIQTLIDLQQAGRMIGLISHVTELKEQMPLRIDVEASRLGSRIQLVGMHA
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattaaattaacaatgcaggctttcggcccttttgctaaaacagaacaaatc
gaattcaatcatttagggttaaatcctctttttctcatcaatgggcctacgggctctgga
aaaacgtcaatactcgatgcgatctgctttgccttgtatggtgaaacgacgggcaatgag
cgtcaaggtaaccaaatgcgctgcgaccaagctgccgcgaatttactcacagaagtgact
ctggagttctccttaaacggtaaacactatcgagttactcgcgcacctgagcaagaagcg
cctaaagcacgtggtgaaggtctgacaacacgcaaacataccgcttccttgtatgaaatc
actaatgatgaagtactgatcacaagtaaaacggctcaggttaaaaatgaagttgccaac
ctacttggattaaatgaaacccagttccgacaggtgatggtgttacctcagggcaaattc
agggagctgttactcgcttcatcaaaagaacgtgaagcgatttttggtcagttattccag
actgacgtgtataagaaaatcgaatttgcgttgaaagataaagccagtgcgatcagcaag
gcaaaagatgagttcgacaatcaaatccgcggtgctttgcaagtggctgaagtgtccaca
gaacaagagttacaagaacgattgattcattctcgtagcgaactcgaacaagcgaaaagc
gttgaggcgaaggagtcagaggctctcaatatcgttaagagtgagttaaacaaagctaaa
tcgctcaatgagctatttaataagcgcgcttcgacagtggcggctcagcaatcacatctg
aagaacaaagcgcagattaccgaactggagtctaagctaaagctagctaagagcgcgagc
catcttgaagtggcgtacgctaacatgcagtcaagcgcgaaacaggtggttggtctagaa
accaagctagaggctctacaagctcaacatctagctgctgaaaaggcttctcaacacgaa
gaacaggtgcttaagagtgccgatgagaacgcacagcagatccctatgctgactgaagcc
ttgtttaaactggataaggtcaaagcaaaactgattgagaaagtggaactagagaaaagc
attagcgcgttaaataccactcgaattgattatgataaaaagctcatccaatacaatgag
cttagacagcaactgcaaaaagaggctgaatcaggtgccagcgcacttgaacaagcgcgt
aaagatctgaccgagaaatcaaatttagaaaccggtctattaagcaatcagcgccttctt
gacgaccttaacaagcttgcagcccaaaccgccgagcttgctcgcctacagcagaagctt
gtcccgattatagaacaagtcgagaaggcgaaaaaagatgttgctgaaaagcaaaaatac
gccgatgaacaagaactgagttggcataattctcaagctgcactgttggctcaaaagctg
gaaaaaggttcgccgtgtcctgtgtgtggtagccaagagcatcctgtaccagccatgttt
caaggtgagcctgtttctaaagagtcggtgcaagccgctcggcagaaagagcgcagtgcg
attgatgaattaaaccgacaaactaatatactggaacaacagcaagcgacaattgtggct
caagacaagcacattaaagagttacaacgcgagttaggtgaaggcgctgctatgagcctt
gagcaactacagcaagagatagcccagcagaaagcgaggttaaatatattagcggcgatt
gatcttgataagatggaaaaaaccgttcaagagctgacccaacgctgcgccaatggtgaa
gcgaaaatcaatgagctgaaatcgtcgatctctgcaaatgactcagcgttagatgttcaa
aaccagcaacttgaaaaagtatcctctgggattgaccgacaatacacatcagttgaagtg
gtcgagcgccaatacctcgctcaaaaagcgaacatttcacagcttgctcagacgttagaa
aaggctcaacaatctgcgaaacaggctaagttagcgcttgttgctattgatacggaaaga
agctcaacgactcagttactcgaagatggaaaagtacacaatcaacaagcggacaaagag
tggcagtctcagctagaactttctgcaatagattccaaacagcagtttcttcaagctcgc
atagagccgcagctatatgatcaatggcaagcgcaaattaatgagtatgttcagactgct
actcagttagaacagtctgttaaagaccttaatgagcagttaaatgacattgaaaagcca
gatcttgataaaaaacaaactgaattggatgccgcagagataaaataccgcgaatgtcga
ggctcgttagatacagtacattcactgactgagcgccttgagaaggtgcaaaaagatatc
aatagcctgcatgataaaaatcagcgcttagaagcggagtacaaggtttacggcactctt
tatgacgtagcgagtggcaaaacgggcagtagagtcagtctacaccgatttgtacttggt
gtgctgctcgacgatgtgctgattcaagcttctcaacgcttaaatatgatgagcaaaggg
cgttatcaactggttcgtaagacagaaggtttcaaaggtgcggcaggtcgcgggctcgat
ttgagtgtcgaagatggctacaccggaaaaacgcgtgatgttgcaaccttgtctggtgga
gagtcgttcatggcggcacttgctttagcgctaggtctatctgatgtggttcagtcatac
agtggtggcattaagcttgatactctgtttattgatgaaggatttggtagcttggaccca
gagtcgttggatttagcgattcaaacactgatcgatttgcagcaagcagggcgtatgatt
ggcttaatatcccatgttactgaacttaaagagcaaatgcctttaagaattgatgtcgaa
gcctctcgattgggtagccgtattcaattagttggtatgcatgcgtag
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