Vibrio europaeus: IXK98_07945
Help
Entry
IXK98_07945 CDS
T07114
Name
(GenBank) EAL domain-containing protein
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
veu
Vibrio europaeus
Pathway
veu05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IXK98_07945
Enzymes [BR:
veu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
IXK98_07945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
QPG34034
LinkDB
All DBs
Position
2:complement(1707681..1709603)
Genome browser
AA seq
640 aa
AA seq
DB search
MSKLNTGTITIPEDMSDNWQTIVNLLAEIVNVPAALIMRIHKEHIEVFSANNNRTHPYHI
SDSETLGQGLYCETVVNENRQLVVPNASADEKWCNNPDMKFGLLAYCGLPVRWPNGDMFG
TICVLDDRENPFGDTYQQLLISFRDSVEAQLKTLYQNHYLQQLNLELESRVSTRTQDLVD
LNYSLNLEIDKRRAAERKIRYQQLHDLGTGFLNRNALESETQQLLDILPLEAHLDDHFKI
GLLHIGFTNGRRIQAKYGYGAWEEVLKEFRQRLTQHTQLNVVTARPSSTDLAFVFKTHQY
ENDINTLCRELVDVSQTEFVVEGEHLHLHSYIGVASSDDTQSAKSLLKYAAEAMQSCKDS
GHKFSFYSQDISDTQKNISQLESYLLQAVRNEDLLLYFQPKVSPLTHRWIGAEALLRWRH
PILGDISNETLIHLAEQNGLIFEVGSFVLRSAIQKAAEWATHVNDFVISVNVSAVQLQSP
QFVNQVQDLLVAYQLPARYLELEVTESGLIADEIVARNTLISLSELGVTLSLDDFGTGYA
SFNYLKKFPFDAIKVDKSFVHQLSHSDDDKEIVRSIISIAKKLNLKVTVEGIENSEHESF
ILAEGCDIGQGFLYGKPMPYDEFEMHLLNQNNLSPKYSYS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagttgaatacagggacgattactattcctgaagacatgagtgacaattggcaa
acaatcgtcaatctactcgcagagatagttaacgttcctgcagcattgattatgagaata
cataaagagcatattgaagtattctctgccaacaataaccgtacgcacccttaccatatc
agtgatagtgaaactctcggacagggtttgtactgtgaaactgtcgtgaatgaaaataga
cagcttgttgtaccaaacgctagtgcggatgagaaatggtgcaataacccagatatgaaa
tttggactgctcgcttattgcggcttacctgtacgttggccaaatggcgatatgtttggc
acaatttgcgtactcgacgatcgagaaaacccgtttggtgatacctaccagcaactgctg
atttcatttcgagactctgtagaggctcagctgaaaaccctttatcaaaatcactatttg
cagcagcttaacctagagcttgaatcgagagtcagtactcgtactcaagatctggttgat
ctcaattattctctcaacttagaaatcgataaacgtcgcgctgctgagcgtaagatccgt
tatcaacaactgcatgatctcgggacaggttttttaaaccgaaacgctttggaatcagaa
acacagcaacttctcgatatcttgcctttagaagcccatctagatgaccattttaaaatt
ggccttttacacataggttttacaaatggaagaagaattcaagccaaatatggttatggc
gcttgggaagaagtccttaaggaattccgtcaacgcctcactcaacacacgcagttaaac
gtcgttacagccagaccatcatcaacagatttagcatttgttttcaaaacgcaccaatac
gaaaatgatatcaacactttgtgccgcgaacttgttgacgttagccagactgaatttgta
gtcgaaggcgaacatctgcacctccatagctatattggcgtcgcgagttcagatgatacc
cagtcagcaaaatcgttacttaagtacgcagcagaagcgatgcagtcatgtaaagactct
gggcataagtttagcttctattctcaagacatttcagatacgcaaaaaaacatcagccaa
ctagagagctacttacttcaagctgtgcgtaatgaagacttattgctctatttccaaccc
aaagtatctccacttacccatcgttggattggtgcagaagccctactccgttggcgtcat
cctatacttggcgatatttctaatgaaacactgatccacctagccgaacagaacggatta
attttcgaggtcggaagcttcgtccttcgctctgcaatacagaaagcggctgaatgggca
acccatgtcaacgattttgttatcagtgttaatgtttcagcagtgcaacttcagagccca
caatttgtcaatcaggtgcaagacttgttagttgcttaccaattacctgcgcgctactta
gagctagaggtgacagaaagcggcttgatagcagacgagattgttgcgcgtaacacactg
atttctcttagcgaacttggcgtgaccttgtcacttgatgactttggtacaggttatgct
tcgtttaactatctgaagaagtttccatttgatgccatcaaggtcgacaaaagtttcgtt
catcagttgtcacacagtgatgacgataaagaaattgtccgctctattatttcaatcgcc
aaaaagctgaacttgaaagtcacggttgaaggcatcgaaaacagcgaacatgagtccttt
atactggctgaaggctgcgacatcggtcagggcttcctctacggtaaacccatgccatat
gatgagtttgaaatgcatctgttaaaccagaacaacttatctcctaagtactcctactcc
taa
DBGET
integrated database retrieval system
