Vibrio europaeus: IXK98_10895
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Entry
IXK98_10895 CDS
T07114
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
veu
Vibrio europaeus
Pathway
veu03410
Base excision repair
veu03430
Mismatch repair
veu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IXK98_10895 (recJ)
03430 Mismatch repair
IXK98_10895 (recJ)
03440 Homologous recombination
IXK98_10895 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
veu03400
]
IXK98_10895 (recJ)
DNA repair and recombination proteins [BR:
veu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
IXK98_10895 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IXK98_10895 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IXK98_10895 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QPG37857
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All DBs
Position
1:464428..466164
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AA seq
578 aa
AA seq
DB search
MIEIQRRPEPDLSSLPDTIAPLLKRIYASRGITSQQQLDTTARALHSYQKLHGIEAAVEL
LFESIQHNKRIIVVGDFDADGATSSALSVLALRMLGSNNVDYLVPNRFEDGYGLSPEVVD
QAIEIGAEVIMTVDNGVSSIDGVRYAKEQGLKVLVTDHHLPGHELPNADAMVNPNLQECA
FPSKALAGVGVAFYLMMALCVHMRKTGWFAEQGMAEPKLMELIDLVALGTVADVVPLDEN
NRILVHQGLQRIRAGKARPGIQALIEVAKRDSRRLVASDFGFALGPRINAAGRLDDMSFG
VELLMANNIHAARRMASELDGLNQTRKEIEEGMKQEAMAFCERLQFGDQDMPHGLVLFQR
DWHQGVIGILASRIKEKFHRPVIAFADGGEGSIKGSCRSIPGLHMRDTLDRIDTQNPGLI
LKFGGHAMAAGLTILEKDFERFSKLFDEAVKQDLDEAALKGVILSDGELKPEEFSMHVAE
MLRAGGPWGQAFPEPLFDGEFKVLHQKLVGEKHLKLMLEPLHKGHPTNIMIDGIAFNVDL
RRWPDASVKTVRLAYKLDINEFRGNQSLQLMIDHIEAK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaatccaacgtcgccctgaacctgatttatcctctctgccagatactattgcg
cctttacttaaacgtatctacgccagtcgaggtatcacatcgcagcagcaactagacacc
acagcgcgtgcgttgcattcctatcaaaaactgcatggcattgaagcggcggttgagctg
ttatttgagtcgattcagcacaacaagcggataatcgtagtgggcgattttgatgcagat
ggggcgacaagttcggctttgtctgtgttggcgcttaggatgttaggctcgaataatgtc
gactacctagtcccgaatcgttttgaagatggttatggcctaagtcctgaggttgttgat
caagcgattgagattggcgctgaagtgattatgaccgtcgacaatggggtttcttcgatt
gatggtgtgcgctatgcgaaagagcagggtttgaaagtattggtgactgaccaccactta
cctggtcatgagctgccgaatgctgatgccatggtcaatcccaacctgcaagaatgtgct
tttccatctaaagcgttggctggcgttggcgttgctttttacttgatgatggcgctttgc
gttcatatgcgtaaaactggctggtttgccgaacaagggatggcagagcctaagttaatg
gagctgattgacttagtggcactcggtacggttgccgatgtcgtgcctctagatgaaaac
aatcgtattttggttcatcaaggattgcagcgaattagagcgggtaaagcgcgtccgggt
attcaagctttgattgaagtggcgaagcgagattcacgtcgtttggtggcttctgatttt
ggtttcgcgttagggccgcgtatcaacgccgcaggtcgtttggatgatatgtcgtttggt
gttgagctgttaatggcaaacaacattcatgctgcacgccgtatggcgagcgagttagac
ggcttgaaccaaactcgtaaagaaattgaagagggaatgaagcaagaagcgatggctttt
tgtgaacgtctgcagttcggcgatcaagatatgcctcatggcctagtactttttcagcgt
gattggcatcagggtgtgattggtattttagcctcacgcattaaagagaagtttcaccgt
cctgtgattgcttttgcagatggtggtgaaggttcgattaaaggttcatgccgctcaata
ccgggtctgcatatgcgtgatactttagatcgcatcgatacccagaaccctggtttgata
ctcaaattcggcgggcacgcgatggcagcgggtctaaccattttggagaaagattttgaa
cgtttctctaaactgtttgatgaagcagtaaagcaagacttagatgaagcggcactgaaa
ggtgtgattttgtctgatggcgaactcaagccagaagagttctctatgcatgtcgccgag
atgcttcgtgctggtggaccttggggacaagctttcccagaacctctgttcgacggtgaa
tttaaagtgcttcatcagaagctggttggcgagaaacacctcaagcttatgctagaacct
ctacacaaaggtcatccaaccaatatcatgattgatggtattgcattcaacgttgatctg
cgccgctggcctgatgcttcagtaaaaacggtgcgcttagcgtataagctcgacattaat
gagttccgcggcaatcaatcgttgcagctgatgattgatcatattgaggcgaagtag
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