Vibrio europaeus: IXK98_12000
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Entry
IXK98_12000 CDS
T07114
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
veu
Vibrio europaeus
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
veu03000
]
IXK98_12000
Transcription factors [BR:
veu03000
]
Prokaryotic type
Helix-turn-helix
Other families
IXK98_12000
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_30
Mg_chelatase
HTH_8
AAA_2
AAA_3
PAS_4
AAA_5
HTH_7
HTH_23
nSTAND6
AAA
NUMOD1
AAA_7
ANT
nSTAND3
HTH_22
Motif
Other DBs
NCBI-ProteinID:
QPG37052
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Position
1:complement(734465..736348)
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AA seq
627 aa
AA seq
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MDKKHQSMIENSWQRCRDAGLVHNSNPIIEMETGQAFSHTLEEHSGLLTTTQQKVLPFYD
SLLSNSNCLITLANTHGQVLNSWGEQRFFSQRQPQVFQNGVHWQEGLIGTNAIGTALETG
SIVQVFHDEHFLTSNRFMTGSAAPLFDADRKMAGVLSISSDAYMPTAHTLGMVKLMSQAI
ENQLIASKFQSDHYLLWFNTSPENIDSQWSSLLVFNEQGVIVSANRRAEVVLGQDLALQR
LEQIFDIKLEQLLSHPPFNPTAISTHSRFSFFGIITPPKVPQGRQIDYRKSIPKTDLKDA
KAPLDLERLNMGDPRLAKAITQASRILNTDIPILIHGETGVGKEVFVNALHLSSERKHAP
MIAVNCAAIPAELVESELFGYEKGAFTGANNKGYIGLIRKADKGTLFLDELGDMPMNVQA
RLLRVLQERKVTPLGSTTSYPVDFKLVSATNRNLKQDVERGTFRQDLYYRVTGLNLSLPS
LRERTDKEALVKFLLAKYALDEETPNISLEVLAMFKSHPWPGNIRQMVSVIQIAIAMAGD
ETICVEHLPDDFLHDLELHDLEAQQPEPIAMTTTNISLLNPPNQAELDQGDWLSVYEQNG
RNVSATAKDLNISRNTLYKRLREQGLR
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaaacatcaatcaatgatcgagaactcttggcaacgctgtcgggatgctggg
ctagttcacaacagcaacccgataatagagatggaaacaggacaagccttctctcacact
ctcgaagaacactcggggttgctgacaacaactcagcaaaaggtcttgcctttctacgac
agcttactttccaatagcaattgcttgatcacgctagcaaacactcatggtcaggtattg
aacagttggggtgaacaacgctttttctcgcaaaggcaaccgcaggttttccaaaacggt
gtgcattggcaggaaggacttatcggcaccaacgcgataggtaccgcccttgaaacgggg
tctattgttcaggtgtttcacgatgaacactttttgacatccaatcgatttatgacgggt
tcagctgcgccactatttgatgctgacagaaagatggctggtgtactgtctatttctagc
gatgcgtatatgccgacggctcataccttgggtatggtgaagttgatgtcacaagcgatt
gaaaatcaactcattgcctctaagtttcaatctgatcactacctattgtggtttaacaca
tcccctgaaaacattgatagccagtggtcatctttgttggtgttcaatgaacaaggtgtg
atcgtttctgctaatcgacgtgcagaagtcgtactcggacaagatctggcgttgcaaaga
ctggagcagatttttgatattaagcttgaacagctgttgtctcaccctccttttaatccg
acggcgattagcacccattcacgttttagcttttttggcattattaccccacctaaggtg
cctcaaggaagacaaatcgactaccgtaaatctattcctaagactgacttaaaagacgca
aaagcaccgctggatttggagcgcttgaacatgggtgatcctagattggcaaaagccatt
actcaggcaagtcgcattctaaataccgacattccgatcttgattcacggtgaaacgggc
gtaggtaaagaggtgttcgtcaacgctctacacctatctagtgagcgaaaacacgctcct
atgattgccgttaactgcgcagcaattccggccgagttagtggaatcagagctattcggc
tacgaaaaaggcgctttcaccggagcgaacaacaaaggctatatcggattaatccgcaag
gcagacaaaggcaccttgtttttagatgaattgggcgatatgccaatgaatgttcaggct
agactgctgcgcgtcttacaagaacgtaaagtaacgccactcggctcaaccacatcatac
cctgttgactttaaattagtttctgcgacaaaccgtaatttaaagcaggatgtagagcga
gggacatttcgccaagatttatactatcgagtcactggactcaatctatctctgccttct
ctgagggagagaacagacaaagaagcattggtgaaatttttactagccaagtacgcgctc
gatgaggaaacgcccaacatcagcctagaagtgctagccatgtttaagtcacacccttgg
ccgggtaatatcaggcaaatggtcagtgtgattcaaattgcgattgcgatggctggcgat
gagactatctgtgtcgaacaccttccagatgactttctgcatgatcttgaactgcacgac
cttgaagcacagcaaccagagccaatcgcgatgacaacaaccaatatcagtctgctgaat
cctcccaatcaagccgagttagatcaaggagactggctaagcgtttatgagcaaaacggc
cgcaatgtttctgcgaccgcgaaagatttgaacatcagccgcaacactttgtataaacgg
ctgagagagcaaggactgcgttaa
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