Vibrio europaeus: IXK98_12035
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Entry
IXK98_12035 CDS
T07114
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
veu
Vibrio europaeus
Pathway
veu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IXK98_12035 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
veu03400
]
IXK98_12035 (recC)
Enzymes [BR:
veu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IXK98_12035 (recC)
DNA repair and recombination proteins [BR:
veu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IXK98_12035 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QPG37058
LinkDB
All DBs
Position
1:742869..746327
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AA seq
1152 aa
AA seq
DB search
MFTVYHSNQVDVLKSLLVELVRLNPLENPFDKEQILVQSPGMSQWLKMELAKEFGVAANI
DFPLPATFIWNMFTEVLPDVPKRSAFNKESMTWKLMHILPGLLSQSEFEPLKRYLEQDED
SSKLYQLSEKIADIFDGYLVYRPEWIASWEAGQAVLELEDEHPWQPILWQALYDHTVALG
QSPYHRANLYEHFIDTLENFQGSFEHLPQRLFVFGITSLPPRYMDALKAIGEHIDVHLMF
TNPCRYYWGEVRDRKFLARLAAKHRKHVVWNQDHSEQEGESEQLKGSIEDNVLDELHTDA
VGNSLLASMGKLGRDNMYLLSQLESHEIEAFVDVERDSLLHQLQADILNLEEHQDDHQLE
TSTHKQVVQLGDKSLTLHACHSPMREVEVLHDQLLAMFDADPSLKPRDIIVMVADINAYS
PAIQAVFGNAPGERFIPYSISDRTADQESPILNAFMQLVNLPNTRCLASELLELLETPAI
LARFGLTEDEFILAKQWVEESGIRWGLNATTGQEFDLPETAQNTWQFGIERMLLGYAMPE
SAGLFESKSGALSPYNEVQGMGAELAGKLAHFIETVSDYRYKLIQTQSIDRWREILTLLL
DDFFSVELEGEAALKSIRDTLANLKEQLTDAAFEQSLSPAIITTYLNNKLSGTRISQRFL
AGQVNFCTLMPMRSIPFRTVCLLGMNDGVYPRSMPPEGFDLMNGRTKPGDRSRRDDDRYL
FLEAVLSAQQTLYISYVGRSIQDNTERVPSVLVSELMEYCHQNYRLDGDQALASDESGEK
LLSELITHHSMVPFSATAFVGEHPSYAKEWLPAVNRLGQVSGEFNRQLQDYLLDATYPLE
LDLVELQRFWRLPVQYFFNRRLKVMFEPPLPVMEDDEPFVLNGLESYQMRDSLLDSLLKQ
QLSGGQDSKGVIESFVKQQRAQGKLPVGAFGDIEFETNRVQAQELVEKLTFLCGSEANDL
EVKLTFDVLGEDKKINLTGWLTQYYQSGLIRFRSGKIRSQDYLSAWIDHLAMSAMGISKR
THMIGYDRKEGVVHLVYPEIADSNYAHGLLSELVRLFYQGMTEPLCYFPRTALAGVEAGF
SRGNWVDDEEKSLKKMADTFNDSFMAAGEGNNPYISRIWPSWNDSLAAQARTVTALVLQT
PRLEVKTSEDAQ
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactgtctaccattccaaccaagtcgatgtcttaaagtcactacttgttgagctc
gttcgtctcaatccattagaaaaccctttcgataaagaacagatcttggtgcaaagcccg
ggtatgtctcagtggttgaagatggaactggctaaagagtttggcgtagccgcgaacatt
gattttcctctgcctgcgacctttatctggaacatgtttacagaggtattgccagatgta
cccaagcgcagtgcttttaacaaagaatcaatgacatggaagctgatgcacatcttgcca
gggcttttgagtcagtcagagttcgagccacttaaacgctatctagagcaagacgaagac
agttccaagctttaccaactctcagagaaaattgccgacatctttgatggttatctggtt
tatcgaccagagtggattgccagttgggaagcggggcaagcggtactggaattggaagat
gagcatccgtggcagccgattttatggcaagcgctttacgatcataccgttgctttaggt
cagtcaccttatcatcgcgccaacttgtacgaacactttattgataccttagaaaacttt
cagggtagctttgaacacttgcctcagcgcttgtttgtgttcggcattacctcactgcca
ccacgttatatggatgcgcttaaagccattggtgagcacattgatgtccacctgatgttt
accaacccttgtcgttactactggggcgaggtaagagacagaaagttcttagcacgttta
gcggcaaaacaccgtaaacatgtggtgtggaatcaagaccactcagagcaagagggcgag
agtgagcaacttaaaggttcgattgaagacaacgtgcttgatgagctgcataccgatgcg
gtgggtaatagcttactcgcttcaatgggtaagttggggcgcgacaatatgtatctgctc
tcgcagctagagtcccacgagattgaagcttttgttgatgtcgagcgagattcattgctc
catcaacttcaagcagacattctcaatcttgaagagcatcaagatgatcatcagttagaa
accagtacgcataaacaagtggtgcaattaggcgataaatccctcacgctgcacgcttgc
catagcccgatgcgtgaagtggaagtcttacatgatcagctattggcgatgtttgatgcc
gatccaagtttaaagccgcgcgatattattgtcatggtggcggacatcaatgcttacagc
ccggccattcaagccgtgtttggcaacgcacccggtgagcgatttatcccttactctatt
tctgaccgtaccgccgaccaagaaagcccaatccttaatgcatttatgcagttggttaac
ctgccaaacacccgttgtttagcgtctgagttactcgaactgcttgaaactccggcgatc
ttagctcgattcgggttaacggaagatgagtttattttagccaaacagtgggtagaagag
tcaggtattcgctggggattgaatgcgaccacagggcaagaatttgatttacctgaaacc
gcacaaaatacttggcagtttggtattgagcgcatgttgcttggctacgccatgccagaa
tcagcagggctgtttgaatctaagtcaggggcgctttcaccatacaatgaagtgcaagga
atgggggcggagttagcgggcaagctggcgcattttattgagacggtcagcgattaccga
tacaaactgatacaaactcaatcaattgatcgttggcgcgaaatactaaccttgctgctg
gatgatttctttagtgtagagctcgaaggtgaggcggcgctcaaatcgattcgtgatacc
ttagccaacttaaaagagcaactgactgacgctgctttcgagcagtcattatctccggcg
attattaccacctatttgaacaacaaactgtctgggacgcggatcagccagcgcttcctt
gctgggcaagtgaacttctgtactttgatgccgatgcgctctattccatttagaacggtt
tgcttactgggcatgaacgatggtgtttatccacgttctatgccgccagagggcttcgac
ctgatgaatgggcgaaccaaaccaggggatcgctctcgccgagatgatgacagataccta
ttcttagaggccgtgctgtctgcacagcaaacgctatacatcagctatgttggtcgctca
atccaagacaatacagagcgtgtgccttcggtgttggtttctgagctgatggaatattgc
catcaaaactaccgcctagatggagatcaggcattggcgagtgatgagtctggagaaaaa
ctgctctcagaactcattacccaccactctatggtgccatttagtgccaccgcgtttgtc
ggtgagcatccaagttatgctaaagagtggttacctgcggtgaatagattaggccaggta
agcggtgaatttaatcgacagctgcaagattacttacttgatgccacctacccattagag
ctggatctagttgagctgcaacgtttctggcgtttgccggtgcaatactttttcaatcgc
cgattaaaagtgatgtttgagccgccgctgccggttatggaagatgacgagccctttgta
ctcaatgggttagaaagctatcaaatgcgtgacagtttattggatagcttactcaaacag
cagctctcgggtggtcaagatagcaagggtgtgattgaaagctttgttaagcagcaacgg
gctcaagggaaattaccggttggcgcatttggtgatattgaatttgaaactaaccgagtt
caagcacaggagttagtggaaaaactgactttcttatgtggcagcgaagccaatgacctc
gaagtaaaactgacatttgatgtcttgggtgaggataaaaagatcaacctaaccggctgg
ctgacacagtattatcagtcgggcttaattcgttttcgcagcggtaagattcgctcacaa
gactatctgtccgcgtggatagaccacctagcgatgtcggcaatgggcatcagtaagcgc
acccatatgattggttatgatcgcaaggaaggggttgttcatcttgtttaccctgaaatt
gcagattctaactacgctcatggcttgttatctgagctggttcgtttgttctatcaaggc
atgaccgaacccttgtgctatttcccgagaactgcattagcgggtgttgaagcaggattc
agtcgcggaaactgggtggatgatgaagagaaatcactcaagaaaatggccgatacattt
aacgatagctttatggccgcaggtgaaggcaataacccttacatctcgcgtatttggcca
agttggaacgacagcttagcagcgcaggcacgtacagtaactgcattggtattacaaacc
cctcgactagaggtaaagaccagtgaagacgcgcaataa
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