Vibrio europaeus: IXK98_13590
Help
Entry
IXK98_13590 CDS
T07114
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
veu
Vibrio europaeus
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
veu03032
]
IXK98_13590 (topA)
03400 DNA repair and recombination proteins [BR:
veu03400
]
IXK98_13590 (topA)
Enzymes [BR:
veu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IXK98_13590 (topA)
DNA replication proteins [BR:
veu03032
]
Prokaryotic type
DNA Topoisomerases
IXK98_13590 (topA)
DNA repair and recombination proteins [BR:
veu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IXK98_13590 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QPG37348
LinkDB
All DBs
Position
1:1092149..1094782
Genome browser
AA seq
877 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTAGQSTGQKAAAVSTKGLSAEE
KARIKKEKDRKSLIKKMGIDPYHGWEANYQVLPGKEKVVAELQKLAKDADSVYLATDLDR
EGEAIAWHLREIIGGDEERYKRVVFNEITKNAIQQAFEKPGELSMDGVNAQQARRFMDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFIPEEFWDIHADTKTQDKTDF
RLQVAQKEGVAFKPVNEAETKSAMAVLEKARYEVCKREDRPTSSKPSAPYITSTLQQAAS
TRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSSEAVEAARGFIATEFGDAYLPSKAIV
YGSKEGAQEAHEAIRPSDVAVKADDLNGMEADAHKLYSLIWNQFVACQMTPAKYDSTTVS
VKAAEYTLKAKGRILKFDGWTRVQRPLGKNEDQILPAVQVGDAIELVTLDPKQHFTKPPA
RFTEAALVKELEKRGIGRPSTYASIISTIQDRGYVKVEQRRFYAEKMGEIVTDRLDGSFD
ELMNYEFTSRMEEKLDQIAEGDTNWKGVLDDFFKDFTGDLEKAEQDEEQGGMKPNHIVYT
DIECPTCSREMGIRTASTGVFLGCSGYALPPKERCKTTINLGDEDGVINVLEEDVETAAL
RAKKRCPICETAMDAYLIDDKRKLHVCGNNPNCEGYIVEHGEYKVKGYDGPVVECDKCGS
DMVLKNGRFGKYMDCTSEECKNTRKILKNGEVAPPKEDPVHLPELPCENSDAYFVLRDGA
SGLFLAASTFPKSRETRAPLVEELVRFKDRISPKFHYLTDAPQQDPDGLPMVVRFSRKSK
ENYVRSEVDGKPSGYTALYVDGKWEITDKRKKPAKKK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagtcactggttattgtggagtcgccagccaaagcgaagaccatcaataagtat
ttaggtaaggacttcattgtaaagtccagtgtaggtcacgtacgtgatctaccgactgct
ggccaaagcactggtcagaaagctgctgcggtatcaaccaagggcttaagtgctgaagaa
aaagcacgaatcaaaaaagaaaaagatcgcaagtcactgatcaaaaaaatgggtatcgac
ccataccatggttgggaagcgaactatcaggttttgccaggcaaagaaaaagtagtggca
gagctgcaaaagcttgcgaaagacgcagacagcgtttatctcgcaaccgatttggatcgc
gagggagaggctatcgcttggcaccttcgtgagatcatcggtggcgatgaagagcgatac
aaacgcgtcgtatttaacgagattactaaaaatgctatccagcaggcgttcgagaaaccg
ggcgagctaagtatggatggtgttaatgcacagcaagcgcgccgttttatggaccgtgtg
gttggctttatggtatcaccactgctttggaagaaggttgcacgaggcctatctgctggt
cgtgtacagtctgtagcggtgaagctgctagtagagcgtgagcgtgaaatcaaagcgttt
attccagaagagttctgggatatccacgcagatactaagactcaagataaaactgacttc
cgtttgcaggtggcgcagaaagaaggcgttgcgtttaaaccagtcaatgaagctgagaca
aaatcagcgatggcagtgcttgaaaaagcacgttatgaagtttgtaagcgcgaagaccgc
ccgacttcaagcaaaccttcagcaccttacattacctcgacactgcagcaggcagcgagt
actcgtttaggttacggcgttaagaaaaccatgatgttggctcagcgtctctatgaagcg
ggttacatcacctatatgcgtaccgactcgactaacttgagttcggaagcggtagaagct
gctcgcggttttatcgcgactgaatttggcgacgcttacctgcctagcaaagcaattgtt
tacggtagcaaagagggcgctcaagaggctcacgaagcgattcgaccatccgatgtggcg
gtgaaagccgacgacctcaatggtatggaagcggatgctcacaaactttactcgctaatt
tggaatcagtttgtggcgtgtcagatgacaccagcaaaatatgactcaactaccgtgagc
gtaaaagctgctgagtacacgcttaaagcgaaaggtcgtatccttaagtttgacggttgg
actcgtgttcagcgtcctttaggtaaaaacgaagatcagattctacctgcagtacaggtg
ggtgatgcgattgagcttgttactcttgaccctaaacagcactttactaagccgccagcg
cgtttcaccgaagcagccttggtcaaagagcttgaaaaacgtggtattggtcgcccttca
acgtacgcgtcaatcatttcaaccatccaagatcgtggttatgtgaaagtcgaacagcgt
cgcttctatgctgagaaaatgggtgaaatcgtcactgaccgtctagatggcagtttcgat
gagctaatgaactacgagttcacatctcgcatggaagaaaagctagaccaaattgcggaa
ggcgataccaactggaaaggtgtgctagatgacttctttaaagactttacaggtgattta
gagaaagcggaacaagacgaagaacagggcggcatgaagccaaaccatattgtctatacc
gatatcgagtgtccgacctgttcccgtgagatgggtatccgtactgcttctacaggtgtt
ttcctaggctgttcaggttacgcattgcctcctaaagagcgttgtaagacgaccatcaac
ttgggtgatgaagatggtgttatcaacgttcttgaagaagatgttgagacggcggcactg
cgtgcgaaaaagcgttgtccaatctgtgaaacggcgatggacgcgtacttaatcgatgac
aaacgtaaactgcatgtttgcggtaataacccgaactgtgaaggttacattgttgaacac
ggtgagtacaaagttaaaggttacgatggcccagttgtcgaatgtgacaagtgtggtagt
gacatggtgcttaagaacggtcgtttcggtaagtacatggactgtacgagtgaagagtgt
aagaacactcgtaagatcctgaaaaacggcgaagttgcgccgccaaaagaagatcctgtg
catttgccagagctaccatgtgaaaactcggatgcttacttcgttcttcgtgatggcgct
tctggtctgttcttagcagcaagcacattcccgaaatcgcgcgaaactcgtgcacctttg
gttgaagaacttgtgcgctttaaggaccgtatctcacctaagttccactacttgactgac
gcccctcagcaagatcctgatggtctgcctatggtagtgcgctttagtcgtaagtcgaaa
gagaactacgtccgctcagaggtggatggtaagccttctggatatacggcgctatacgta
gacggtaaatgggaaattaccgataagcgtaaaaagccagccaagaaaaagtaa
DBGET
integrated database retrieval system
