Vibrio europaeus: IXK98_19050
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Entry
IXK98_19050 CDS
T07114
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
veu
Vibrio europaeus
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
veu03016
]
IXK98_19050 (rnd)
Enzymes [BR:
veu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IXK98_19050 (rnd)
Transfer RNA biogenesis [BR:
veu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IXK98_19050 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
QPG37913
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All DBs
Position
1:complement(2279682..2280797)
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AA seq
371 aa
AA seq
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MNYQIITQTAQLDIVCQSARQADVVMLDTEFVRTRTYYPQLGLIQLFDGQNLSLIDPTVI
EDMAPFVELLKDTSVLKVLHACGEDLEVFHNSFECLPYPMVDTQLMAAFLGHGLSTGFAA
LVESYLGVELDKSESRTDWLARPLTDKQLEYAAADVYYLQPLYEQLFEKITQASWWDAAQ
QESDLLASKRIKTVNLEMAYLDVKGAWQLKPKELSILKPLATWRLKEALRRDLALNFIFK
ENDLLTVARLGIQNHSQMEQEGMDYRSVQRHSARIISIVKSAKKTPVDEYPEKIERLMDM
PGYKQKFKVLKDEVKRASQASGLATEFLASKKQLNQLMSWVWKKDRDPAKLPDVMQSWRL
ELFGEKLNKLL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
gtgaattatcagattattactcaaacggcgcagcttgatatcgtttgtcaaagtgcacga
caagctgatgttgtgatgttggatacagagtttgttcgtacccgaacatactatccgcag
ctaggccttatccagctctttgatggacagaatctttctcttatcgatccaacggtgata
gaagatatggctccgtttgttgaactgcttaaagatacgtccgtacttaaggtgcttcat
gcttgtggtgaagacttggaagtattccataacagctttgagtgcttgccatacccaatg
gtcgacacccaacttatggctgctttccttggccatggtttatcgacaggttttgccgct
ttagtggaaagctatttaggggttgagctagataagagtgagtctcgtaccgattggttg
gcgcgaccactaacagacaaacagctagaatacgcagctgcggatgtttattacttacag
cctttgtatgagcagttatttgagaaaattactcaagctagctggtgggatgctgcgcag
caagagagtgatctactcgcttccaaacgtattaaaactgtcaacctagagatggcgtat
cttgatgtgaagggcgcttggcagcttaagccaaaagagctttcaattcttaagcctttg
gctacatggcgtttgaaagaagcattgcgtcgagatttagcacttaactttatctttaaa
gaaaacgacctactcactgtggcgcgtttgggtattcaaaaccatagccagatggaacaa
gagggtatggactaccgttcggtacagcgccacagcgcacgtattatctcaatcgtaaaa
tcggccaagaagacacccgtcgacgagtatccagaaaagattgaacgcctaatggatatg
ccgggttataaacagaaattcaaagtgctaaaagatgaagtaaaacgcgcttcacaggct
agcggattagccactgaatttttagcctctaagaagcagcttaatcagctaatgagttgg
gtgtggaaaaaagacagagatcccgccaagctacctgacgttatgcaaagctggcgatta
gagctgtttggtgaaaagctaaataagcttctctag
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