Vibrio europaeus: IXK98_20425
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Entry
IXK98_20425 CDS
T07114
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
veu
Vibrio europaeus
Pathway
veu00260
Glycine, serine and threonine metabolism
veu00460
Cyanoamino acid metabolism
veu00630
Glyoxylate and dicarboxylate metabolism
veu00670
One carbon pool by folate
veu00680
Methane metabolism
veu01100
Metabolic pathways
veu01110
Biosynthesis of secondary metabolites
veu01120
Microbial metabolism in diverse environments
veu01200
Carbon metabolism
veu01230
Biosynthesis of amino acids
veu01240
Biosynthesis of cofactors
veu04981
Folate transport and metabolism
Module
veu_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IXK98_20425
09102 Energy metabolism
00680 Methane metabolism
IXK98_20425
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IXK98_20425
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IXK98_20425
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IXK98_20425
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IXK98_20425
Enzymes [BR:
veu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IXK98_20425
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QPG35807
LinkDB
All DBs
Position
1:complement(2552699..2553949)
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AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEALAIDRACELFGCDYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDETGQINYDEMEQLALEHKPKMIIGGFSAYSQI
VDWARMREIADKAGAWLFVDMAHVAGLIAAGVYPTPVPHAHVVTTTTHKTLAGPRGGLIL
SNAGEEMYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKEYQARVVKNAKAMVAQ
FQERGYKIVSNGTENHLFLVDLIDKDITGKDADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGSPAITRRGFTEDDAKDLANWMCDVLDNIGNEEVIEATKAKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagcgtgatatgaacatcgcagattacgatgcggaactgttcgcagcaatccaa
gaagaaactcttcgccaggaagaacacattgaactaatcgcttctgaaaactacacaagc
ccacgtgtaatggaagctcaaggttctcagctaactaacaaatacgctgaaggttaccca
ggcaagcgttactacggtggttgtgagtacgtagataaagcagaagctcttgctatcgac
cgtgcatgtgagcttttcggttgtgactatgcaaacgtacagccacactctggttctcaa
gcaaacagcgctgtttacatggcactgctaaacccaggcgatacagttctaggtatgagc
ctagcgcacggtggtcacctgactcacggttcaccagtaaacttctctggtaagcactac
aacgttattccttacggtatcgacgaaacgggtcaaatcaactacgacgaaatggagcaa
ctggctcttgagcacaagcctaagatgattatcggtggtttctcagcttactctcaaatc
gtagattgggctcgcatgcgtgaaatcgcagacaaagctggtgcttggttgtttgttgat
atggctcacgtagcaggtctaattgctgcaggtgtatacccaacgccagtgccacacgct
cacgttgtgacaacaacgacacacaaaacgctagcaggtccacgtggtggtctaatcctg
tctaacgctggcgaagagatgtacaaaaaactgaactctgctgtattccctggtggtcaa
ggtggccctctaatgcacgttatcgcgggtaaagcggttgcatttaaagaagcgatggag
ccagagtttaaagagtaccaagcgcgcgttgttaagaatgcaaaagcgatggttgctcag
ttccaagagcgcggttacaaaatcgtttctaacggtacagagaaccacctgttcctagtt
gatctgattgacaaagacattacaggtaaagatgcagatgcagcactaggtgcagcaaac
atcacggtaaacaaaaactcagtaccaaacgacccacgtagcccattcgttacttctggt
atccgcgtaggttctccagcaatcactcgccgtggtttcactgaagacgatgcaaaagat
ttagcgaactggatgtgtgacgttctagataacatcggtaacgaagaagttattgaagcg
actaaagctaaggttcttgaaatttgtaagcgtctaccagtttacgcttaa
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