Vibrio europaeus: IXK98_20575
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Entry
IXK98_20575 CDS
T07114
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
veu
Vibrio europaeus
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
veu01011
]
IXK98_20575
Enzymes [BR:
veu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
IXK98_20575
Peptidoglycan biosynthesis and degradation proteins [BR:
veu01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
IXK98_20575
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM3_NFP
LysM2_CERK1_LYK3_4_5
HrpF
Motif
Other DBs
NCBI-ProteinID:
QPG35831
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Position
1:2583527..2585089
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AA seq
520 aa
AA seq
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MRVKHSWVLALVLSGCQLTQPTDSGEAVSPETNNPTIKQTEPSAQPAKPIIKPEPLVTPQ
TQQDVWKRIAMQLEMPIPDHKLVDYYRTWYLKHPNHLKTVSQRAEPFLYLITEKIEQRDM
PLELALLPVVESSFDAFAYSHGSAAGLWQFVPGTGRQQGLKQNFWYDGRRDVAASTDAAL
DYLTYLNKRFDGEWTHAIAAYNSGGGRVSSAIRKNTKLGKPTDFFSLDLPKETSGYVPKL
LALADVVANQEKYGINIPEIANKPVVELVDPKEQLDLAIAANYAGISVKELQGLNPAYNQ
WATAPDGPHQLLLPKHSVAKFNKAVTENRGKGMKVVRYKVKSGDNLSVLAQKYNTTANVI
RTANNLSGNNIRVGQHLMIPTSTRDDKAYALSASNRLAKTQAKSRGQFKLTHTVRSGDSL
WSIARANKVSHQSLAKWNGMGPRDTLRVGQKLVIWKNSSDGAIIRTVFYNVRTGDTISGI
ASKFKVKSNDIVKWNDLSRQKYLKPGQKLKLYVDVTKVSV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttaaacacagctgggtattagcgctagtattatcaggttgtcagcttacccag
ccgacggattctggagaagccgtctctccggaaacaaacaatccaacaattaagcaaact
gagccaagtgctcaaccagcaaaacctatcatcaaacccgagccattggtgactccacag
acacaacaagatgtctggaagcgtatcgctatgcaattagagatgcctatccctgaccac
aagctcgttgattactaccgtacatggtatctgaaacatcctaaccacctaaaaactgtc
tcacaacgtgccgaacccttcttgtatcttattaccgagaagatcgagcagcgtgatatg
ccgttagaactcgcgcttttgcctgtggtagaaagctcttttgatgcttttgcctactct
catggtagtgctgcgggtttatggcaattcgtaccgggaacaggtagacagcaaggcctt
aagcaaaacttttggtatgacggacgtcgtgatgtcgctgcttcaaccgatgccgcccta
gattacctaacctatctcaacaaacgttttgatggcgagtggacacacgcgattgctgcc
tacaacagtggtggcggacgagtgtctagtgcaattcgcaaaaataccaaactcggcaag
cctacggatttcttctcacttgatttacctaaagaaaccagtggctacgtaccaaagctg
cttgcgctagcagacgttgtcgctaaccaagaaaagtatggtatcaatattccagaaatt
gctaacaagcctgtcgttgaacttgttgatcctaaagagcaacttgacctcgccatagcc
gctaactacgcgggtatcagtgttaaagagctacaaggccttaaccctgcatacaaccaa
tgggcgacagcaccggacggtcctcaccaattgcttcttccaaaacatagcgtcgctaag
ttcaataaagcggtaacagaaaatcgcggtaaaggaatgaaggtcgttcgctataaggtg
aagtccggcgataacctcagtgtcttggcacaaaagtacaacaccactgctaacgtcatt
cgcaccgctaataatctgagtggcaacaacattcgtgtcggccagcacttgatgatccca
acgtcgacacgcgacgacaaagcctatgcgcttagcgcgtcgaaccgtttagctaagaca
caagctaagtctcgtggccaatttaagctcactcacacagtccgctctggcgatagctta
tggtcgattgcgcgcgccaacaaagtgtcacaccagtcattagcaaagtggaatggcatg
gggccaagagacactttacgtgttggtcaaaaactggtgatttggaaaaacagctctgac
ggcgcgatcatccgcactgtgttctacaacgtacgcactggtgacactatcagtggcatt
gcgagcaaatttaaagtcaaatcgaacgacatcgttaaatggaacgatctcagcagacaa
aagtaccttaagccaggtcagaaacttaagctgtatgtagacgtcactaaggtaagtgta
tga
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