Vibrio europaeus: IXK98_21300
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Entry
IXK98_21300 CDS
T07114
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
veu
Vibrio europaeus
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
veu03016
]
IXK98_21300 (truB)
Enzymes [BR:
veu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IXK98_21300 (truB)
Transfer RNA biogenesis [BR:
veu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IXK98_21300 (truB)
Prokaryotic type
IXK98_21300 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QPG35972
LinkDB
All DBs
Position
1:complement(2749023..2749970)
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AA seq
315 aa
AA seq
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MARRRKGRPINGVVLLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGEVVETRPVDVSLDQLEACIDKFRGESDQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEIVLHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTGVAKYPYEKMVTLEQLNELLEQAHRDEVAPKELLDPLL
LPMDTAVEDLPEVNLNAELTNLVQHGMPVQVFGAPEGTPLRMTSGEEKLFIGVAEVNDNG
KVAPKRLVVFREEAE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccgtcgtaaaggtcgtccaattaatggtgttgtccttttagacaagccaaca
ggcatttcatctaatgatgcgctgcagaaagtaaaacgcatttactttgcagagaaagca
ggtcataccggtgctctggatcccctcgcgacaggtatgctgccaatctgccttggtgaa
gcaaccaagttctctcagttcttgttggattctgataaacgctaccgagtgatcgccaag
ttaggtgagcgcacggatacttcggattctgatggtgaagtcgttgagactcgtccagtt
gacgtttcgctagaccagcttgaagcatgcattgataagttccgtggtgaatctgatcaa
gtgccttcgatgttttcggcattgaaataccaaggtaagcctttgtatgaatatgcacgt
aaaggtattgaagtgccgcgtgaatcacgcaaaattacggtttatgaaatcgtcctgcat
cgctttgaaggtgatgaagttgagatggaggtccactgttcaaaagggacttacatccgc
actatcgttgatgatctcggtgagatgctaggctgtggtgctcatgtcactatgctacgt
cgtacaggggttgctaaatatccatatgagaagatggtcactctagagcaacttaatgag
cttttagagcaagcacatcgtgatgaagtcgcaccgaaagagctacttgatcctctgctg
ttaccaatggataccgcggtagaagacttaccagaagtaaaccttaatgctgaactgacg
aatttggttcaacacggtatgccagtgcaagtattcggcgcaccagaaggcacaccgctg
cgtatgacttccggtgaagagaagctgttcattggtgttgctgaagtgaacgataatggc
aaggtggcaccaaagcgcctagttgtcttccgtgaagaagctgagtaa
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