Vibrio europaeus: IXK98_21350
Help
Entry
IXK98_21350 CDS
T07114
Name
(GenBank) EAL domain-containing protein
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
veu
Vibrio europaeus
Pathway
veu05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IXK98_21350
Enzymes [BR:
veu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
IXK98_21350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_8
PAS_9
PAS
Motif
Other DBs
NCBI-ProteinID:
QPG35980
LinkDB
All DBs
Position
1:2757406..2759445
Genome browser
AA seq
679 aa
AA seq
DB search
MLSQQLQHWFTKITANSPFFFAILDNQHNYAMVNGRYCDIAGLTPTELVGMCDNQIMGQQ
FYDHLKPYYDRAFKGESIEAEMTMGDLDLETSLHFNISPIENEGKIEHVIFHALDTSEKQ
ILIRSLEESEGKFSTLTSLLPEGIFLVEDDCILSANPSALRLLGFDSIQDVLGESLSRLF
VDEKTKTVFSESLASMLGETPLTCLTSPRCGFERKVQLQADAAMILGSDSQLILIHDAEA
APTTLATNKQEDIHRDSLTGLYNRFGFTKRLEQLIHNETPLIMLYLDIDNFKNINDSLGH
HIGDKVIKEVSSRLKRLLPQQAVLGHLGGDEFGIILPEPENNRMAEMLSERIISLINQPF
DLHHFSKRLACSIGSVAYPGDGNDARILLQNADTAMYEAKDRGRNRLIKFNDQMNKEARM
RLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALIRWKHPVEGYISPGAFIPVAER
AGLIEHLGRVVMRDVFSTVKRWKLQGILPGRVAINLSPEQFGNPKLIDYMEKLLRTTELD
PSCITFELTESAVMSDSEHTVQMLNAIKKLGFALSIDDFGTGYSSLSYLARFPIDELKID
RAFISDIDTLPKQITVIENIINLGKSLDLTVVAEGVETQQQATLLSNLNCHSIQGFHFYR
PQPRQEVEELFAQNRRHKN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgctatcgcaacaattacagcactggtttacaaaaattacggccaatagtccgtttttt
ttcgccattttggataaccagcataactatgcaatggttaatggccgctattgcgatatc
gcagggctaactccgactgaacttgttggtatgtgcgacaaccagatcatgggacagcag
ttctatgaccacctcaagccctactacgatagagcctttaaaggcgaatccatcgaagct
gaaatgaccatgggcgatctcgacttagagacgagcctacatttcaacatctcgcctatc
gaaaacgaaggcaagattgagcatgtcattttccacgctcttgatacctctgaaaaacaa
attctaattcgttctcttgaggaatctgaaggcaaattttcaaccctgactagcttattg
ccagaaggtatcttcctcgttgaagatgattgtattctctcagccaacccatccgccttg
cgattactaggctttgattcgattcaagatgtactaggcgaaagcctgtcgcgcttattt
gttgatgagaaaaccaagaccgtcttttctgaatcgttagccagtatgcttggggaaaca
ccactgacttgtttaacgagtcctcgctgtggctttgaacgtaaggttcaacttcaggca
gatgctgccatgattctgggtagcgactcacaattgatattgattcatgatgcggaagcc
gcaccgactacactcgcaacaaataaacaggaagatatccaccgtgactcgctaacgggg
ctgtacaaccgttttggttttaccaagcgtttggaacaactgatccacaacgaaacccct
ttgatcatgctctacctcgacattgataacttcaaaaatatcaatgactcattaggtcac
catattggcgataaagttattaaagaagtctcatcgcgcttgaagcgtttgttaccacaa
caagcggtgttggggcacttaggtggcgatgaattcggcattatcttgcccgagcctgaa
aacaatcgcatggcagaaatgctatctgagcgaattatctctctgattaaccagcccttt
gatctacaccactttagcaagcgcttagcgtgttcaattggtagtgtcgcttatccggga
gatggtaatgacgcacgtattttgctgcagaatgccgacacggccatgtatgaagcgaaa
gatcgcggtcgtaaccgtctgatcaagttcaatgatcagatgaacaaagaagcccgcatg
cgtctgtggcttgaaatcgaactgcaaaaagcactgcagcaaaatggtcttgaggtttgg
tatcaaccgaaagttaatgctcgtgattttagcatcaacggtgcagaagctctgatccgt
tggaagcatccagtcgaaggctatatcagccctggcgctttcattccggttgcagaacga
gcaggattgattgagcacttaggtcgcgtggtaatgcgtgatgtatttagcacggttaag
cgttggaagttgcaaggtatcttacctgggcgcgtggcaatcaacttgtctccggaacaa
tttggtaatcctaaacttattgattatatggaaaagctgctgcgcaccactgagcttgac
ccaagctgcatcactttcgaactaacagaaagtgcggtcatgagtgacagtgaacatacc
gtacaaatgcttaatgcgattaaaaagcttggctttgcactgtcaattgatgacttcggt
acaggctattcttcgctatcttacttagcacgcttccctattgatgagcttaaaatcgac
cgcgcgtttatctctgatattgatacgcttcctaaacaaatcacagttatcgagaacatc
atcaaccttggtaaatcactcgacctcaccgtggttgctgaaggtgtcgaaactcagcag
caagccaccctgctgtctaacctcaactgtcattctattcagggtttccatttctaccgt
cctcagcctagacaagaggttgaagagttgtttgcgcaaaatcgccgccacaaaaactaa
DBGET
integrated database retrieval system
