Vibrio europaeus: IXK98_22015
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Entry
IXK98_22015 CDS
T07114
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
veu
Vibrio europaeus
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
veu03021
]
IXK98_22015 (rapA)
Transcription machinery [BR:
veu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IXK98_22015 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
AAA_22
Baculo_PEP_C
CC_BshC
Motif
Other DBs
NCBI-ProteinID:
QPG36088
LinkDB
All DBs
Position
1:complement(2898117..2901026)
Genome browser
AA seq
969 aa
AA seq
DB search
MTFALGQRWISDTESDLGLGTVVALDARTVTLMFAASEENRVYARNEAPVTRVTFNVGDV
IDSQEGWSLKVEQVVEDQGLFSYVGIREDSGEEGVILREIMLSNQIRFNKPQDKLYAGQI
DRMDNFVLRYRALMNQYQQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLAGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA
DSDNPFDTQQYVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSPEQPSREYQMVE
GLAERTPGVLLLTATPEQLGRESHFARLRLLDSDRFFDYQEFVKEEEQYAPVADSVSALF
SGQSLENEAKNQITELLSEQDVEPLFRIIESDSDEEAKAAARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPQRNVHLLPMPIPQQYTTSMRVSGMIGGKISPEARALKNLYPEEIFQEFE
GDDASWWQFDSRVNWLLEKIKEKRSEKILVIASRASTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQNRDVDIHVPYLEGTSQAILARWFEEGLNAFAETCPTGRTVYDKYSERLIEMLASGD
TSDLNEVIAESAALNKELKAQLEQGRDRLLEMHSNGGEKAQAIVDKIAATDGDANLVTFA
LSLFDTIGLDQDDKGENALVVTPSEHMLVPSYPGLPYEGATITFDRETALSREDMNFISW
EHPMIQGGIDLLMSEGVGTTAVSLLKNKALPVGTMLLELVYKVDAQAPKRSGISRFLPTT
PIRIMLDGKGNDLSSQVEFESFNRQLSPVGRHIATKLVASVQAQVHQLVEAGEKLIVEKV
DAIRNQAQQEMQASLNSELERLQALKAVNPNIRDEEIEAIDGQIKELTGYIGQAQYQLDS
LRMIVVSHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgctttgggccaacgctggatcagcgatacggaaagcgacctaggtttagga
accgttgtagcattggatgctcgtactgtgacactaatgtttgcagcttctgaagagaac
cgagtttacgctcgaaatgaggcgcccgtaaccagagtaacctttaatgttggcgatgta
attgatagccaagaaggatggtctcttaaagttgagcaagtggtcgaagaccaagggcta
tttagctatgtcggtatacgcgaagacagcggtgaagaaggtgtcattctgcgtgaaatt
atgctgagtaaccagattcgttttaacaagccacaagataaactgtatgcaggtcagatc
gaccgcatggataactttgtgcttcgttatcgggcattgatgaaccaatatcagcagcac
aaaagcccaatgcgtggcttgtgtggtatgcgtgccggcttaatcccgcatcagctttat
attgctcatgaagttggtcgccgccatgcacctcgcgttctgttagccgacgaagtaggt
ttaggtaaaaccatcgaagcggggatgatcattcatcagcaagtgctggcaggtcgtgct
gagcgtatcctaatcgtggtaccagaaacactacagcaccaatggctagttgagatgatg
cgtcgttttaacctgcatttctctatctttgatgaagaacgttgtatcgaagcatttgct
gactctgacaacccttttgatactcagcaatatgtgctgtgttcccttgatttcttacgt
aagagtcgtaagcgttttgagcaagctttagaaggtgagtgggatctccttgtcgtagat
gaagcacaccaccttgaatggagcccagagcagcctagtcgcgaataccaaatggtcgaa
ggactcgctgagcgcacaccaggtgttttactgctaaccgcaacaccagagcagctaggc
cgtgaaagtcactttgcccgtctgcgtctattagactctgaccgtttctttgattaccaa
gagtttgttaaagaagaagagcaatacgcgccagtcgccgattcagtgagtgccttgttc
tccggtcagtcattagagaatgaagcaaagaaccaaattacagagttgctttcagagcag
gacgtcgaaccactgttccgcataatcgaaagcgattcagatgaagaggccaaagcggcc
gcgcgtcaggaactgatcgacaatctgatggatcgtcacggcacaggtcgtgttctgttt
aggaacacacgtgcggcaatcaaaggcttcccgcagcgtaacgttcatctactaccaatg
ccaatcccacagcagtacaccacctctatgcgtgtatctggcatgattggtggcaagatt
agccctgaagctcgcgccttgaagaatctttacccagaggagattttccaagagttcgaa
ggcgatgatgcaagctggtggcagtttgatagtcgtgttaactggctgctagagaagatt
aaagagaagcgtagcgagaaaatcttggtgatcgcttctcgtgcaagtaccgcgttgcaa
cttgaacaagcattacgtgaacgtgaaggtattcgagcgacagttttccacgaaggtatg
tcgattcttgagcgtgataaagctgcggcttacttcgcacaagaagaagggggcgcgcag
gttcttatctgtagtgaaatcggttcagaaggtcgtaacttccagtttgcgaaccaactg
gtgatgttcgatttaccctttaaccctgacttgcttgagcaacgtattggtcgcctagac
cgtattggtcagaaccgcgatgttgatatccatgtgccttacttagaagggacgtcgcag
gctattttggcgcgttggttcgaagaggggttaaatgcgtttgcggaaacgtgtccaaca
ggacgtaccgtttatgacaagtactctgagcgtttaattgagatgctggcatccggtgat
accagtgatcttaatgaagttattgcagaatctgcggcgctgaataaagagcttaaagca
caacttgagcaaggtcgtgaccgtttacttgagatgcactcaaatggcggtgaaaaagca
caagcgattgttgataagattgcagcgaccgatggtgatgctaacctagtcacttttgct
ttaagcctgtttgatacgattggcttagaccaagatgacaaaggtgagaatgcgcttgtt
gtgacgccatctgagcatatgctagtgccaagttatcctggcttaccatacgaaggcgca
accattacctttgaccgcgaaacagcactctctcgtgaagatatgaacttcatcagctgg
gagcacccgatgattcagggtggcatcgacttactgatgagtgaaggtgtgggcacgacg
gcggtttctctacttaagaacaaagctctacctgttggtaccatgctgttagagcttgtc
tacaaagttgatgctcaggcacctaagcgcagtggtattagccgtttcttaccgacaaca
cctatccgaattatgcttgatggtaaaggtaacgacttatcctcacaggttgagttcgag
agcttcaaccgtcagctaagcccagtgggtcgtcatatcgcaactaagctagtcgcttcg
gttcaggcgcaagttcaccagttggttgaagctggcgaaaagctgattgttgaaaaagtt
gatgcgatccgtaatcaggctcagcaagagatgcaagcaagcttgaacagtgagttagag
cgtctacaagctttgaaagcggttaacccaaacattcgtgacgaagagattgaagcgatt
gatgggcaaatcaaagagcttacgggttacatcggccaagctcagtatcagttggattcg
ttacgtatgatagtcgtcagtcataattag
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