Vibrio europaeus: IXK98_23525
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Entry
IXK98_23525 CDS
T07114
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
veu
Vibrio europaeus
Pathway
veu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IXK98_23525 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
veu03019
]
IXK98_23525 (recQ)
03400 DNA repair and recombination proteins [BR:
veu03400
]
IXK98_23525 (recQ)
Enzymes [BR:
veu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IXK98_23525 (recQ)
Messenger RNA biogenesis [BR:
veu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IXK98_23525 (recQ)
DNA repair and recombination proteins [BR:
veu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IXK98_23525 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
QPG36343
LinkDB
All DBs
Position
1:complement(3209090..3210928)
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AA seq
612 aa
AA seq
DB search
MTSTLLAQQPSADLPTPQRILEDVFGYQSFRDGQQEVIESAVAGQDSLVIMPTGGGKSLC
YQIPALAREGLTLVISPLISLMKDQVDQLKANGVAAECVNSTMPREELISVYNRMHSGAL
KLIYVSPERVLMRDFIERLESLPLSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVP
VMALTATADDATRNDIMQRLQLQDPLTHLGSFDRPNIRYTLVEKHKPISQVVRFLESQRG
SCGIIYCGSRKKVEMVTEKLCNNGLRAASYHAGLDADERAYVQEAFQRDDIQIVVATVAF
GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKD
DGPQKQVEAHKLNAMSAFAEAQTCRRQVLLNYFGEYREKPCGNCDICLDPPKHFDATEQA
QKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKLSTYGLGRENSHDYWVSVFRQL
IHKGLLFQNITRNSTLQLTEEARPLLRGEMSLELAVPRLDTAARAAKSDKLSSKNYDKKL
FAKLRKLRKAIADEDGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLEKYADPF
LDLIQEHLTNHG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgacacttttagcccagcaaccttcagccgatttgccgacgccgcaacgcatc
ttagaagatgtttttggttatcagagctttcgtgatggtcagcaagaggtgattgagtcg
gctgtcgctgggcaagatagcttagtgatcatgccgacgggtggtggtaaatctttgtgt
tatcagatccctgccttagcacgtgaggggctaactttagttatctcaccgttgatttca
ttaatgaaagatcaggtagaccaactgaaagcaaatggcgtagccgctgagtgcgttaac
tctactatgccaagagaagaactgatttccgtctataaccgcatgcattctggtgcgtta
aagctgatttacgtgtcacctgagcgtgtgctaatgcgtgattttatcgagcgtttagaa
agcttaccattatctatgattgcggtggatgaagcgcattgtatttctcagtgggggcat
gacttcagaccagagtatgcatctttaggtcaactcaaacagtattttcctcatgtccct
gtgatggcactgaccgcaacggcagatgatgcgactcgcaatgacattatgcagcgcttg
caattgcaagatccgcttactcatcttggtagttttgaccgtcctaacattcgttacacc
ctagtcgaaaagcataagcctatttctcaggtggtgcgctttctagaaagtcagcgcggc
agctgtggcattatttattgtggtagccgcaagaaagtagagatggtgacagaaaagctg
tgtaacaacggcttacgtgctgcgagttatcatgctggtctggatgctgacgaacgtgct
tatgttcaagaggcgttccagcgtgatgatatccaaatcgttgttgcgactgtcgcgttt
ggcatggggattaataaacctaatgtccgctttgtggtgcattttgatattccacgcaat
atcgagtcctactatcaggaaacaggccgcgccgggcgagatggtttacctgccgaagcg
atgatgctttatgacccagccgatatcagttggctgcgccgcatgttggatgaaaaagat
gacggtccacaaaagcaagttgaagcgcataagctgaatgcaatgagtgcttttgcagaa
gcgcaaacctgtcgtcgccaagtgctgcttaactattttggtgagtaccgtgagaagcca
tgtggcaactgcgatatctgcctcgatccacctaagcactttgatgccactgagcaagca
caaaaagcactctcttgtgtgtatcgggttaatcaaagctttggtatgggttacgtggtc
gaagtattgcgtggtatgcaaaacatccgagtgcgtgaaaatggtcatgacaagctgtcg
acttatgggctagggcgtgaaaatagccatgactattgggtcagtgtctttcgtcagttg
attcataaaggtttgttgttccaaaacattactcgcaactccaccttgcaactgactgaa
gaagcaagaccgcttttacgtggtgaaatgtcgttagaacttgctgttccacgcttagat
actgccgctcgcgctgccaaatcggataagctttcgagcaaaaattacgataagaagtta
tttgcgaagttgcgtaagcttcgcaaagccattgctgatgaagatggcctaccaccatac
gtagtgttcagtgacgcgacattaattgatatggcagaaatattgccgacctcttacggt
gaaatgcttgccgtaaacggagtggggcagcgcaagttagaaaaatacgccgacccattc
ttagatcttattcaggagcacttaacaaatcatggctga
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