Vibrio europaeus: IXK98_23555
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Entry
IXK98_23555 CDS
T07114
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
veu
Vibrio europaeus
Pathway
veu03420
Nucleotide excision repair
veu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IXK98_23555 (uvrD)
03430 Mismatch repair
IXK98_23555 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
veu03400
]
IXK98_23555 (uvrD)
Enzymes [BR:
veu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IXK98_23555 (uvrD)
DNA repair and recombination proteins [BR:
veu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IXK98_23555 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
IXK98_23555 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
SseB_C
PhoH
Motif
Other DBs
NCBI-ProteinID:
QPG36349
LinkDB
All DBs
Position
1:complement(3216805..3218976)
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AA seq
723 aa
AA seq
DB search
MDPSLLLDGLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLMSVEQASPFSIMSV
TFTNKAAAEMRGRIEELMMGSASGMWNGTFHGICHRILRAHYLDAKLPEDFQIIDTDDQQ
RLLRRLIKAQNLDEKQWPARQVSWWINGKKDEGLRPKHIDAYHDPVTKTYLQLYTAYQEA
CDRAGLVDFAEILLRAHELLRDNKFVREHYQARFKHILVDEFQDTNNIQYAWLRMMAGPD
SHVMIVGDDDQSIYGWRGAKIENIEKFTQEFPSVNTIRLEQNYRSTKTILEASNTLIANN
TERMGKELWTDGAEGEPISVYSAYNELDEARFAVNKIKEWQDKGGALNDAAMLYRNNAQS
RVLEEALIQAGLPYRIYGGMRFFERQEIRDALSYLRLMSNRNDDAAFERVVNTPTRGLGD
KTLETIRFAARDRGCTMWQASVALLDEKVLAGRAAGALSRFVELVNALEDDTCAFSLHEQ
TDHVIKYSGLFAMYEQEKGEKSKARIENLEELVTATRQFEKPEEAEEMTLLTAFLTHAAL
EAGEGQADEFEDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY
VGMTRAMEKLYITYAEMRRLYGQDKYHKPSRFIRELPETCLDEVRMKAQVSRPASSGRFS
QTVVKESFNETGFSLGSRVMHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYAKL
ETL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatccttccttacttctcgatggtctgaatgacaagcagcgtgaagccgttgctgcc
ccactcgaaaacttactcgtcttagctggcgcaggtagtggtaaaacacgtgtgcttgtg
catcgtatcgcgtggttgatgtctgttgagcaagcttcgccgttctccattatgtcggtg
accttcaccaacaaagcggcagcagaaatgcgcggacgtattgaagagttaatgatgggg
agtgcttcggggatgtggaacggcacattccatggtatctgtcatcgtatccttcgggct
cactatctggatgccaagttacctgaagattttcagatcattgatacagacgatcagcag
cgccttttacgtcgcttgataaaagctcaaaacctagatgaaaaacagtggccagcgcgt
caggttagttggtggatcaatggcaaaaaagatgaaggtctgcgtccaaaacatattgat
gcttaccatgacccggtgacaaaaacctaccttcagctttataccgcttatcaagaagct
tgtgaccgagcaggcctcgtcgattttgctgaaatcctgcttcgtgcccatgagttattg
cgtgataacaagtttgttcgagagcactatcaagcgcgcttcaaacatatcttggtcgac
gaattccaagataccaacaatattcagtatgcttggttacgtatgatggctgggcctgat
tcacacgttatgattgtcggtgatgacgatcagtcaatctatggatggcgcggggcaaaa
atcgagaacattgagaaattcactcaagagttcccaagcgtgaatactattcgccttgag
cagaactatcgctcaaccaaaactatcctagaagcatcaaatactctgattgccaataac
actgaacgtatgggcaaagagctgtggacggacggtgcggaaggcgagccaatttcggtt
tactctgcctataacgagttggacgaagctcgctttgccgtgaataagataaaggaatgg
caagataaaggcggagcactgaacgatgcagccatgctttatcgaaacaacgcccagtca
cgtgtacttgaggaagcattaattcaggcaggcttaccttatcgtatttatggtggtatg
cgattcttcgaacgccaagaaatcagagatgcattaagttacttgcgcttgatgtcaaac
cgcaatgacgatgccgcttttgaacgagtagtgaatacgccaactcgtggcctaggcgat
aaaacgctggagacgattcgttttgctgcgcgcgatcgcggttgcactatgtggcaagcc
agcgttgcgctccttgatgaaaaagtcttagctggtcgcgctgctggagccttaagccgt
ttcgttgaattggttaacgcgttagaagatgacacttgtgcgttttcactgcatgaacaa
accgaccacgtcattaagtactcaggtttgttcgctatgtatgaacaagaaaaaggcgag
aagtctaaagctcgtattgagaacttggaagagctggtaacggcgacccgacagtttgaa
aagccagaagaagcggaagaaatgacgctactgacagcctttttaactcacgcggcgctg
gaagcgggtgaaggtcaggctgacgagtttgaagatgctgttcagcttatgacactgcac
agtgcaaaaggtctggagttcccgcttgtgtttatggtcggtgtggaagaaggcatgttc
ccaagccagatgtctgcggaagaagcggggcgcttggaagaggagcgccgcctttgctac
gtcggcatgacgcgagcaatggaaaaactctacatcacctatgcagagatgcgccgttta
tacggtcaagataagtaccataagccatcccgttttattcgtgaactgccagaaacgtgt
cttgatgaagtgcgtatgaaagcgcaggtgagtcgtccggcaagttcaggtcgctttagc
caaacagtggtgaaagagagcttcaatgaaactggctttagcttgggctcacgagttatg
caccctaagtttggtgagggtaccattatcaactttgaaggcagtggtccacaaagtcgt
gtacaagtcgcctttaacggtgaaggcatcaaatggttagtcactgcttatgcgaagcta
gaaacgctgtaa
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