Vibrio europaeus: IXK98_23790
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Entry
IXK98_23790 CDS
T07114
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
veu
Vibrio europaeus
Pathway
veu03030
DNA replication
veu03410
Base excision repair
veu03420
Nucleotide excision repair
veu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IXK98_23790 (polA)
03410 Base excision repair
IXK98_23790 (polA)
03420 Nucleotide excision repair
IXK98_23790 (polA)
03440 Homologous recombination
IXK98_23790 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
veu03032
]
IXK98_23790 (polA)
03400 DNA repair and recombination proteins [BR:
veu03400
]
IXK98_23790 (polA)
Enzymes [BR:
veu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IXK98_23790 (polA)
DNA replication proteins [BR:
veu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IXK98_23790 (polA)
DNA repair and recombination proteins [BR:
veu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IXK98_23790 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IXK98_23790 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QPG36390
LinkDB
All DBs
Position
1:complement(3268505..3271297)
Genome browser
AA seq
930 aa
AA seq
DB search
MANIPDNPLILIDGSSYLYRAFHAYPETMSNGEIPTNAVYGVVNMLRSMMRQFSSDRIAV
VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICTPGVEADDVIGT
LAYQASQAGMPVLISTGDKDMAQLVDDNVTLINTMTNVVMDREGVVEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGGINKLYENLDDIAPLGFRGSKTMAKKLLDNE
ENARMSYELATIKLDVELEETPEFLLKNEPNKDELIKLYGQLVFKSWLNELLDGGTGVVE
ADEKSGNQSAASTSAAADIDTSAVTIDRSQYETILDESSFNAWLEKLKAAEVFAFDTETD
SLDYMVANLVGLSFATEEGIAAYVPVAHDYLDAPAQLDRDWVLAQLKPILEDDAQAKVGQ
NLKYDASVLARYGIKMKGIKHDTMLASYVYNSVGGKHDMDSLALRFLQHSCISFEQIAGK
GKNQLTFNQINLDEASPYAAEDADVTLRLHNRLMSNIEQDEKLKGIYQDIEVPLVPVLSR
IERTGVLIDDMKLSAQSQEIAQRLDELEQKAFEIAEQEFNMNSPKQLQAILFEKMGLPVI
KKTPSGTPSTNEEVLQELALDYPLPKLILEYRGLAKLKSTYTDKLPKMINPETGRVHTSY
HQAVTATGRLSSTDPNLQNIPIRNDEGRRIRQAFIAPHGYKIMAVDYSQIELRIMAHLSG
DKALLDAFQQGKDIHSATAAEIMGTTIDQVSTEQRRRAKAVNFGLIYGMSAFGLAKQLGI
PRGEAQDYMNKYFERYPGVMQYMEDTRSAAAEQGYVETIFGRRLHLPEIKSRNGMRRKAA
ERAAINAPMQGTAADIIKKAMLLVDEWLQTEGDGRVKLLMQVHDELVFEVQESALAEIES
KVQQLMESAAQLNVPLVAEAGHGDNWDQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggccaacattcctgataatccgttgattttgattgacggttcttcttatttataccgc
gcattccacgcttatccagaaacgatgagtaatggcgaaatcccaaccaatgccgtttat
ggtgtggtcaacatgcttcgtagcatgatgcgtcagttctcttcggatcgtatcgcggtt
gtctttgatgcaaaaggaaaaaccttccgtgatgatatgtacccagagtacaaagctaat
cgtcctccaatgcccgatgatctgcgttgtcagattgagcctttacacaatgtaatccgc
gcgatgggtttgccattgatctgtaccccgggcgttgaagcggatgatgtgattggtacg
ctcgcttaccaagcatcccaagcgggtatgcctgtgttaatcagtaccggtgataaagat
atggctcagctggtggacgacaatgttactttgatcaacaccatgaccaatgtggtgatg
gatcgtgaaggtgtggttgagaagtttggtatcccaccagagctgattattgattacctc
gcattaatgggcgataaggtcgataacattcctggtgtaccgggtgttggtgacaaaacc
gcaacggctttgctgcaaggtattggcggtattaacaaactgtatgaaaacctcgacgac
attgctccattaggtttccgcggctcgaaaaccatggcgaaaaagttactcgacaatgaa
gaaaatgcacgcatgtcgtatgaacttgcgacgatcaagctagatgttgagttagaagag
acgcctgaatttctgcttaaaaatgagcctaacaaagatgagttgatcaaactgtatggt
cagttggtgttcaaatcgtggctaaacgagcttcttgatggtggtactggtgtggttgag
gctgatgagaagtctggcaaccagagcgctgcatcgaccagtgctgcggcagatatcgac
acatctgcagtgactatcgaccgtagtcagtatgaaactatcctagatgagtcttcattc
aatgcttggctagaaaagctaaaagctgctgaggtattcgcgtttgatactgaaaccgat
agcttggattacatggttgctaaccttgttggtctctcttttgcgaccgaagaaggcatt
gctgcctatgttcctgttgcccacgactacctagatgcccctgcgcagctagatcgtgat
tgggttctggcgcaactaaaacctatcctagaagatgatgctcaagctaaggtaggtcaa
aaccttaagtacgatgcgagcgtgttagcgcgttacggcattaagatgaaaggcattaag
catgacaccatgttggcgtcttacgtctataacagcgtgggtggcaaacatgatatggac
agcttggcgctgcgtttccttcagcacagctgtatttcattcgagcagattgcaggtaaa
ggcaagaaccagctaaccttcaaccaaatcaaccttgatgaagcgtcaccttacgcggct
gaagatgccgatgttacgctacgtcttcacaaccgtttaatgagcaatattgagcaggat
gaaaagctgaaaggtatctaccaagatatcgaggttcctttagtgcctgtgctttctcgt
atcgaacgtactggtgttctgatcgatgacatgaagttgtctgctcagtctcaagagatt
gcccagcgtctagatgagttagagcagaaagcctttgaaattgctgagcaggaattcaac
atgaattcgccaaagcagcttcaagccatcctgtttgaaaagatgggtctacctgtgatc
aagaagactccttctggtacgccttcgactaacgaagaagtgctgcaagagttggcgttg
gattacccattacctaagctgattcttgaataccgtggtctagctaaacttaagtctacc
tacacagataagctacctaaaatgattaacccagaaactgggcgtgtgcatacctcgtat
catcaagcggtaaccgcgacgggtcgtctttcttcaactgatcctaacttacagaacatt
ccaattcgtaatgatgaaggtcgtcgtatccgacaggcattcattgcgccacatggctat
aaaattatggctgtcgattactcgcagattgaattgcgtattatggcgcatttatctggt
gataaagccctgttggatgctttccaacaaggtaaagatatccactctgcgaccgctgct
gaaattatgggtacgaccattgaccaagtgagtactgagcagcgtcgccgtgcgaaggca
gttaacttcggccttatctatggtatgagtgcttttggtttggctaagcagctaggtatt
cctcgcggcgaagcgcaagactacatgaacaagtacttcgagcgttacccaggtgtgatg
cagtatatggaagatacacgcagcgccgccgcagagcagggctatgttgaaactatcttc
ggtcgtcgtttgcaccttcctgaaattaagtcacgtaacggtatgcgtcgtaaagcggca
gaacgagcagcgattaatgcgccaatgcaaggaacggcagctgacattatcaagaaggcg
atgctgttagttgacgagtggcttcaaactgaaggtgatgggcgagtgaaactgcttatg
caggttcacgatgaattggtatttgaagttcaagagtcagctttagccgaaattgaaagt
aaagtacaacaattgatggaatccgcagcacagttaaatgtcccccttgttgccgaggca
gggcatggagacaactgggatcaggcgcactag
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