Vibrio europaeus: IXK98_25440
Help
Entry
IXK98_25440 CDS
T07114
Name
(GenBank) EAL domain-containing protein
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
veu
Vibrio europaeus
Pathway
veu05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IXK98_25440
Enzymes [BR:
veu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
IXK98_25440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
G-alpha
Motif
Other DBs
NCBI-ProteinID:
QPG38048
LinkDB
All DBs
Position
pVeu-CECT8426:complement(356296..358182)
Genome browser
AA seq
628 aa
AA seq
DB search
MADIDTAQLVVPHSVLQSWQEVVDLVAKMTQCPASLVMRIHKNDIEVFSSSRSENNPYAP
NAKDSLGHGLYCETVIRERRMLNVPNALNDPEWDHNPDIKLGMICYCGLPVFWPDDTPFG
TICMLDSQERYFDEDAMSLLARFQTAIEGQLETLYRKEELAQFNQELENKVAERTKTLAD
LSSRLLKEIEQRTAAENHLDFHLHYDPLTKLPNRITLADDLAKQMASLEDDEQITLIYFS
LRNFKFVNASYGYMFGDQILSSLSQRICHKLPKKWKLARIVGSDFVLAAQHLRTPELQEQ
AIERITNACTQPFSVNGMNINLQCNLGIAVAPLDATDSFSLIQRACSAMSEGKNEGLQVA
YFNFAAQKAAEERLRLESHLSKALQNNELEVHFQPIICLKQGGKIIGAEALLRWSNPTLG
QVAPDRFIPLAESNGQIIEIGYFVLHQALKQAAEWHRTSPHSFKVAINISPIQFQEQHFV
QHLQDIIDLYQLPAKCVELELTEGILLQDEEYAQNVLAQLRQFGVSISLDDFGTGYSSLS
YLQKYAFDTLKIDRSFINQLEHNQHNRELTRAIIAMAHKLNMMVIAEGVEERYQEDFIRT
EECNYAQGFLYGKAVPADEFTQQMISKL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcagacatagataccgctcaattagtcgttccccattctgtactccagagttggcaa
gaagttgttgatttggttgccaaaatgacacaatgccccgcttcgctagtcatgcgtatt
cataaaaatgacattgaggtgttttctagcagtcgaagcgaaaacaacccctacgcacca
aatgcaaaagactcacttgggcatggtctgtattgcgaaaccgtgattcgcgagcggcgc
atgctgaatgtccccaatgcgctcaacgatcctgaatgggatcataatccagacattaag
ctgggtatgatttgttactgcggactgcctgtgttttggccagatgatacccccttcggg
actatctgcatgctcgacagccaggaacgctactttgatgaagatgcaatgtcgctgctt
gctcgctttcaaacagctatcgaaggtcaactcgaaacactataccgtaaagaagaactt
gcccaattcaatcaggagttagaaaacaaagtcgcggagagaaccaagacacttgccgat
ctcagcagccgtttactcaaagaaattgagcaacgtaccgctgcggaaaaccacttggat
tttcaccttcactacgacccgctcactaaactccccaatcgaattacactggcggacgac
ctcgctaaacagatggcttctctagaagacgatgaacaaattaccctgatttatttcagt
ttgagaaactttaagtttgttaacgcaagctatggttacatgttcggtgatcagattttg
tcgtcactgagccaacggatctgccacaaactgcccaaaaagtggaaactggccagaatt
gttggctctgatttcgttctggccgcccagcacctgcgtacacccgaacttcaagaacaa
gccatagaacgcattaccaatgcgtgcacccaaccttttagcgtcaatggtatgaatatc
aatttgcaatgtaacttaggtatcgcagtggccccattagatgcaacagactcgttcagc
ctcattcaacgagcctgctcagcaatgagtgaaggtaaaaacgaaggtttgcaggtcgcc
tactttaactttgctgcacaaaaagccgccgaagagcgcttacgactggaatcacatctt
tctaaggcgctgcagaacaacgaactcgaagtccatttccagccgatcatctgtctcaaa
caaggagggaaaatcattggtgctgaagcgctgttacgatggagtaatcccacgctgggg
caagtcgcgccagaccgttttattcctctagcggaaagtaacggccaaataatagaaatc
ggctacttcgttttgcatcaggcgctgaagcaagctgcagaatggcatcgcacatccccg
cactcgtttaaagtggccatcaacatctcaccaatccaattccaagaacaacactttgta
caacacttacaagacattattgatctttaccaactgccagcgaagtgcgttgaattggag
ctaacagaaggtattctgcttcaagatgaagagtatgcgcaaaatgtcctcgcgcagttg
cgtcaattcggcgtcagcatttctcttgatgactttggtacagggtactcttcactcagt
tatctacaaaaatacgctttcgatacgctaaaaattgatcgcagctttatcaatcagtta
gagcacaaccaacacaaccgagagcttacaagagccatcatcgcaatggcacacaaactc
aatatgatggtgatagcagagggggtagaagagcggtatcaagaagacttcattcgaacc
gaagaatgcaactacgctcaaggctttttgtatggtaaagccgttcctgctgacgagttt
acgcaacaaatgataagtaaactttag
DBGET
integrated database retrieval system
