Vibrio antiquarius: VEA_000033
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Entry
VEA_000033 CDS
T01107
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vex
Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vex03400
]
VEA_000033
DNA repair and recombination proteins [BR:
vex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VEA_000033
Archaeal homologous recombinant proteins
VEA_000033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
PUMA_CC
AAA_16
DUF6494
AAA_5
Crb2-like_BRCT-like
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ACY52720
LinkDB
All DBs
Position
2:35029..38085
Genome browser
AA seq
1018 aa
AA seq
DB search
MKPIKLTMQAFGPFAKTEVIDFEKLGRNPLFLINGPTGSGKTSILDAICFALYGETTGNE
RQGIQMRCDLSAQDLPTEVVLEFSLHGKQYRVVRSPEQEAPKARGEGMTVKKHTAALYEL
GETEKLITSKTTQVKTEVSNIIGLNETQFRQVMVLPQGKFRELLLASSKEREEIFGQLFQ
TDIYKKIEYALKDKASAISKAKDEFDNQIRGALQVAGVSSEQELLHQLEQATEQLEVDRK
KEQASLDKLNVAKSELQKAETINGEFSKREQAENALKLHLEHSDSIKVRQQQLENAKNAN
KIELPYVALQNAKTQTQELRQKIVALKESLDKANAVTKEKENLQQSAKEAAAKVPQLTQL
QYQLESMKDKLVEKANLERKITAGHQQKQQFEATLKQYIELKDKLAFQAQQGQKDLEQAR
VDVALVGSIDAEIKQKQRLLQDLQKLHGLTLELSKLTALTVSKQQSLQEASQRYMQCQQA
ADTIELKWHNAQAAVLAQRLKAGEACPVCGSQAHPNLATFVEEVVTKEQVQAARVKEREA
QTSLNQLSNQLEQHNVVIIQHQNQIDQLKEELGEHAASEISTVQTELQALNDQLLRLQSI
DIEKLEKNVEQLNQRCLVGENKIHELQNQMAANESTVQANQEHLTQLQASIDPKYSSVDA
LERDISLTKEQILTLNTGLEKAQNALQQAVLAQSNAESQLVTNKQWLSESEQKLSQAELA
WNEALQASKFEDESSYLNSRVTDDELQAWQKEIDNFKQTQTKLEQTLHDLNHALKALERP
DLDSLNDSLTTLQAQYIEVRNQLDTTRSTFERIEKVRKDIATLHEKNSKLEEEYKVFGTL
YDVASGKTGSRVSLHRFVLGVLLDDVLIQASQRLSLMSKGRYILARKTEGFKGAAGRGLD
LMVEDGYTGKTRDVATLSGGESFMAALALALGLSDVVQSYSGGIRLDTLFIDEGFGSLDP
ESLDLAIQTLVDLQQTGRMIGVISHVSELKEQMAQRVDVEPSRVGSTVSVKSQLTRTV
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattaaacttaccatgcaagcctttggtccgtttgcaaaaaccgaagtcatt
gactttgaaaagcttggccgtaaccctctgtttttgattaatggtcctacaggctcaggt
aaaacgtcgatcttagatgccatttgctttgccctttacggtgaaactaccggtaatgag
cggcaaggcatccagatgcgatgtgacttatcggcgcaagacttaccaaccgaagtcgtt
ctagaattttcgttacatggcaaacaataccgagttgtgcgatctccagagcaggaagcg
cccaaagcgcgtggtgaagggatgacggtaaaaaagcacactgcggctctttatgaactc
ggcgagaccgaaaagctcatcactagcaagacgactcaagttaaaacagaagtgagcaat
attattggtttgaatgaaacgcaatttcgccaagtaatggtattgcctcaaggaaaattc
cgggagctgttgcttgctagttctaaagagcgcgaagaaatttttggtcagctctttcaa
acggacatatataaaaaaattgagtacgcgctcaaagataaagcgagcgcaatcagtaaa
gcgaaagatgaatttgataatcaaattcgaggcgctttacaagttgcaggagtgagttca
gagcaggaattattacaccagcttgaacaagcaactgagcagctagaggtcgatagaaag
aaagaacaagcttcgttagataagctaaatgttgctaaatctgaattgcaaaaagcggaa
actattaatggagagttttcgaaacgagagcaagcagaaaacgcactcaagctgcatcta
gaacactcagactcgataaaagttcgtcaacagcaattagaaaatgctaaaaatgccaat
aagatagaattaccctacgtcgcattacaaaatgcaaaaactcaaactcaagagctcaga
caaaaaatcgtagctttgaaagagagccttgataaagccaatgctgttacgaaagaaaaa
gaaaacttgcagcaaagtgcaaaagaagccgcggcaaaagtcccacagttaacgcaactg
cagtatcaacttgaaagcatgaaagacaagttggttgaaaaagccaacttggaaagaaaa
ataacggcaggtcatcaacaaaagcaacaatttgaagcaacgttaaaacagtacatagag
ctgaaagacaagttggcgtttcaggcgcaacagggccagaaagatctagagcaagcccga
gtagatgttgcgcttgttggcagcatcgatgcggaaataaaacaaaaacaacgactacta
caggatctacaaaagctgcatggtcttactttggaactctctaaactcacggcgttaacc
gtaagcaagcagcagtcattacaggaagccagtcagcgctatatgcagtgtcaacaagcc
gctgatacgatagagcttaagtggcacaacgctcaagcggcagtattagcgcagcgacta
aaggcaggtgaagcatgtccggtatgtggcagccaagcgcatcctaaccttgcgacgttt
gttgaagaagtcgttacaaaagagcaagttcaggctgccagagtgaaagaaagagaagct
caaacctcactgaaccagctaagtaatcagctagaacaacataacgttgttattattcag
catcagaatcaaatcgaccagttgaaagaagagcttggtgagcatgcagcgtctgagatc
tcgacggttcaaactgagttgcaggcgcttaatgatcaacttctacgtctacaatctatt
gatattgaaaagctagaaaagaacgttgaacagcttaatcaacgctgcttagtgggtgaa
aataaaattcatgagctgcagaatcaaatggcggcaaatgaatcaaccgttcaagcaaac
caagaacacttgactcaattacaagcttccattgatccgaaatacagttccgttgatgcg
cttgagcgtgacatttcgctcacaaaagagcaaattctgaccttgaatacaggtttagaa
aaggcgcaaaacgctttgcagcaagcggtattagcgcaatcgaatgctgaaagtcagtta
gtgacgaacaagcagtggctatctgagtcagaacaaaagcttagccaagcagaattagcg
tggaatgaggcattacaggcgagtaaatttgaggatgaaagcagttatctaaatagcaga
gtgacagatgatgagcttcaagcgtggcagaaagaaatagacaacttcaaacagacacaa
accaagcttgaacaaacactacatgatttaaaccatgcattgaaagcgcttgaaagaccg
gacttggattcgcttaacgacagcttaaccactctgcaggcgcagtatattgaagtaagg
aatcagctcgataccacgcgctcaacctttgagcgaattgaaaaagttcgtaaagatatt
gctacgctgcatgagaaaaatagcaagttagaagaagagtacaaagtgtttggtacgtta
tacgacgttgccagcggtaaaacaggcagcagggttagcctacatcgctttgttcttggt
gtactgttggatgatgttttaattcaggcctctcaacgtttaagcctcatgagtaaaggg
cgctatattcttgctcgaaaaacagagggcttcaaaggcgctgcgggtcgcggcttagat
ttaatggttgaagatggttacacaggaaaaacacgtgatgttgcgacactttccggtggt
gaatcgtttatggcagcgcttgctttggcgcttggcttgtcggatgttgtgcaatcctat
agtggtggtatccgtttagacactttattcattgatgaggggttcggtagtttagaccca
gaatctttggatctcgccattcaaacgctagtggatttgcaacagactggacgcatgatc
ggtgttatttctcacgtttctgagttaaaagagcaaatggcgcagagggttgatgttgaa
ccatcaagagtcggttcgacagtatcggtcaaatctcaactaactaggacagtataa
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