Vibrio antiquarius: VEA_000912
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Entry
VEA_000912 CDS
T01107
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
vex
Vibrio antiquarius
Pathway
vex00040
Pentose and glucuronate interconversions
vex01100
Metabolic pathways
vex01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VEA_000912
Enzymes [BR:
vex01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
VEA_000912
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Motif
Pfam:
Pectate_lyase22
PD40
Tricorn_N
Tricorn_2nd
Motif
Other DBs
NCBI-ProteinID:
ACY53598
UniProt:
A0ACA6QTT5
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All DBs
Position
2:complement(1042758..1043915)
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AA seq
385 aa
AA seq
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MAKGDVITLNFETFVDSDTQVKVTRLTPTDVICHRNYFYQKCFTQDGKKLLFAGDFDGNR
NYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTV
DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL
EVIHQDTAWLGHPIYRPFDDSMVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESC
THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNFDGSLMVGD
GCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTP
NDDGVLFTSDFEGVPAIYIADVPES
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggtgatgtgattactctcaacttcgaaacgtttgttgatagtgatacccaa
gtgaaagtgacgcgattaacgccaacggacgtgatttgtcaccgtaactacttttaccag
aagtgctttactcaggatggaaaaaagctgctgtttgcaggtgatttcgacggaaatcgc
aactattacctgcttaaccttgaaacgcaacaagcagtccaactgacggaaggtaaaggt
gacaacacctttggcggtttcatttcgacggatgagcgtgcatttttctacgtgaaaaac
gaactgaatttgatgaaagtcgatttagagacgctggaagaacaagtcatttatacggtc
gatgaagagtggaaaggctacggtacttgggtggcaaattctgactgtaccaagttagtc
ggcatcgagattctaaaacgtgattggcaaccgctgacatcgtgggaaaagtttgccgag
ttctaccacaccaatccaacttgtcgcctaattaaagtggatatcgaaaccggtgagctg
gaggtgatccatcaagacactgcgtggctaggtcacccaatttaccgtccgtttgatgac
tcaatggttggtttctgtcatgaaggtccgcatgatttggtggatgcgcgcatgtggctg
gtcaatgaagatggcagcaacgttcgtaaaatcaaagagcacgcagaaggtgaatcgtgc
acgcacgagttctggattccagatggcagcgcaatggcgtacgtttcttacttcaaaggt
caaactgatcgcgtgatttacaaagccaacccagagacattagagaatgaagaagtgatg
gtgatgccaccttgttctcaccttatgagtaacttcgatggttctttgatggttggtgat
ggttgcgatgcgccagttgatgttgcagacgcggacagctacaacatcgaaaatgacccg
ttcttgtatgtattgaacacaaaagcgaaatcggcgcaaaaactgtgtaagcacagcaca
tcttgggatgtgttggatggcgatcgccaaattactcacccgcatccgtcattcacaccg
aacgatgatggtgtgttgtttaccagtgactttgaaggcgttcctgcgatttacattgcg
gacgtgccggagtcttag
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