Vibrio antiquarius: VEA_000955
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Entry
VEA_000955 CDS
T01107
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vex
Vibrio antiquarius
Pathway
vex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VEA_000955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vex03000
]
VEA_000955
03400 DNA repair and recombination proteins [BR:
vex03400
]
VEA_000955
Enzymes [BR:
vex01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
VEA_000955
Transcription factors [BR:
vex03000
]
Prokaryotic type
Helix-turn-helix
AraC family
VEA_000955
DNA repair and recombination proteins [BR:
vex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VEA_000955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ACY53640
LinkDB
All DBs
Position
2:complement(1086673..1088040)
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AA seq
455 aa
AA seq
DB search
MFIHPHTSLTFEQCHKARVARDSRFDGRFYVAVKTTGIFCRPICPANLPKEENVEYFTDK
AQALQAGYRPCLRCRPDSAPGSWAWKGVETTFQRAISLIDRGELHHHSVSELAERVGISD
RYLRMLFEQYLGMSPKQYAQYQQLMFAKQLLHSSSMSVTEVGFAAGFNSTRRFNDAFQKF
LKLTPSQVRRKEFDGMGSNRIALPYRGELNWQHMLDFYRLRAIEGVELVSDESYQRNVCL
DTSKAWFKATKGEGYLELAFEIEDVTKLQNLVSDIRRMFDLDADICTVEQHLDYVAPGLV
SSKGIRIPGVWNAWEAGVRAILGQQVSVKAAIGQLNLLVTTLSGESEKRFFPTPDAIANT
DVSFLRMPQSRKETLVRFAQFMQDNSETDPQQWLALKGIGPWTVSYAQLRGQSQPDCFLD
KDLVVKKAMQRYPSLNMHTAAPWGSYATFHLWNQS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtttattcacccccatacctcactgactttcgagcagtgtcataaggcgcgagtcgcg
cgagacagccgctttgatgggcgattttatgtggctgtgaaaacaacggggatcttttgt
cgcccaatttgtccggctaatttacctaaagaagaaaatgtagagtacttcaccgataaa
gcgcaagctctccaagcggggtaccgtccttgtttgcgttgtcgacctgatagcgcgccg
ggttcttgggcatggaaaggcgtagaaacgacctttcaacgagcaatttcgttaattgat
cgaggggagttgcatcaccactcggtgtctgagctagcagagcgtgttgggatttcggat
cgctacttacgtatgttgtttgagcagtatctaggcatgtcacccaagcagtatgcgcaa
tatcaacaattaatgttcgccaaacagttacttcattccagttctatgtcggtcacggaa
gtaggctttgccgccggttttaatagtacacgccgctttaacgatgctttccaaaagttt
ctcaaactgacgccttctcaagtccgtcgcaaagagtttgacggtatgggtagcaatcga
attgccttgccttatcgaggtgaattgaattggcagcacatgttggacttctaccgttta
cgagcgattgagggggttgagctggtgagtgatgagagttatcagcgcaacgtttgtctg
gataccagtaaagcgtggtttaaagcaaccaaaggtgaagggtacctagagctagcgttt
gaaattgaagacgtaacgaagctgcaaaacttggtgtctgacattcgtcgtatgttcgat
cttgacgccgatatttgtactgttgagcagcatttggattatgttgctcccgggctcgtg
tcgagtaaaggtattcggattcctggtgtatggaatgcatgggaggctggagttcgagcg
attttaggccaacaagtgtcggttaaagcggcgattggtcaacttaacttattggtgacc
acacttagtggagagtcagaaaaacgctttttcccgacaccagatgcgatagctaatacc
gacgtgagctttttgcgcatgccgcaaagccgtaaagagacgctagtgcgcttcgcccag
ttcatgcaggacaactcagaaaccgacccccagcagtggctagctttgaaaggcattgga
ccttggacagtcagttatgctcaactgcgagggcaatctcaacccgattgctttttagat
aaagacttggtggtgaaaaaggcgatgcagcgttacccatcactgaatatgcacactgcg
gccccttggggaagctacgcgacgtttcacttatggaatcaatcatga
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