Vibrio antiquarius: VEA_001126
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Entry
VEA_001126 CDS
T01107
Name
(GenBank) deoxyribodipyrimidine photolyase/cryptochrome family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vex
Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vex03400
]
VEA_001126
Enzymes [BR:
vex01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VEA_001126
DNA repair and recombination proteins [BR:
vex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VEA_001126
Prokaryotic type
VEA_001126
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACY53811
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Position
2:complement(1292179..1293660)
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AA seq
493 aa
AA seq
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MQTINVVWLKRDLRLTDHQPLTQALSSKHPTVLLYIVEPLLLNNPHYSERHWRFVWQSLQ
DMNETLKAYGHRITVLFGDALACFQSIQMQYQINAVFSHQEIGLNCTFERDKQIADWLHE
QNITWFEFEHGAVIRGAKDRQGWDKHWDLVMRSSISPLDLQTNLLHSLDAESLGCAFSPP
SSWLSKCKGMQTGGSQLAWKTLEDFFNRRGRDYYRSISSPTASRTACTRLSPYLAWGNIS
LREVYQYLLKHWQVVGFRRSLIALSSRLHWHCHFIQKFESEYDMEFYCVNRAYESLIKQS
STFDEEKLAAWKSGYTGIPLIDACMRCLHQTGYINFRMRAMLVSFLTHHMNMDWRTGVTH
LAQLFLDFEPGIHYPQFQMQAGVTGTNTIRIYNPVKQAQEHDPDGAFIYKWVPELQMVPT
PLLFEPWTMTQMETVMYHLKPDSRYLAPIVDLNSAAKDARERLWAWRKRADVKQEGKRIL
TRHVRPSKESRAR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaatcaatgtcgtgtggttaaagcgagatttaagactgactgaccaccagccc
ttaacacaagcattgtcgtcaaagcacccaacggtacttttatatattgttgaaccgttg
ctgttaaacaaccctcactattctgagcgtcactggcgatttgtttggcaatcattgcaa
gacatgaatgagacgctcaaagcctatggacaccgcatcacggttctgtttggcgatgcc
ttagcatgttttcaatcaattcaaatgcaatatcaaatcaacgctgtgttttctcatcag
gaaatagggctcaactgcacctttgagcgcgataagcaaattgccgactggctgcatgag
cagaacatcacgtggtttgagttcgagcacggtgctgttattagaggagcaaaagaccgg
cagggttgggacaaacattgggatttggtcatgagatcctccataagccctcttgatctg
cagaccaacttgttgcattcattggatgcagaatcactcggctgcgcgttttcgccacct
tcatcctggctatcaaaatgcaaaggaatgcaaacgggaggaagccaactcgcttggaaa
acactggaggactttttcaatcgtcgaggtcgtgattactatcgaagcatttctagtccc
acagcctcacgtacagcctgtactcgcctttctccatacctcgcttggggtaatatatcc
ttgcgtgaagtttatcagtacctattgaaacactggcaagttgttgggtttcgtcgcagc
ttaattgcgttgtcttcacggctgcattggcactgccatttcatacagaaattcgagtcg
gaatacgacatggagttttactgtgttaaccgggcttacgaatcgttgattaaacaaagt
agcactttcgatgaagaaaagttagcagcatggaaatctggatatactggcatacctttg
atcgatgcctgtatgcgctgtttgcatcagactggctatataaactttcgcatgcgtgcc
atgctggttagttttctcactcatcacatgaacatggattggcgaactggcgtgacgcat
ttagcgcaactattcctcgactttgagcctggtattcattacccacaattccaaatgcaa
gccggggtaactgggaccaatacaatccggatttacaacccggttaagcaagcccaagaa
catgaccctgatggcgcgttcatctataaatgggtgcctgaattgcaaatggtccccacc
ccactattgttcgagccctggacaatgacacagatggaaaccgtcatgtaccacttgaaa
ccggatagccgttacctagcgcctattgtcgacctaaatagcgcagctaaagacgcaagg
gagcgtctatgggcatggcggaaacgggccgatgtaaaacaagaaggcaaacggatttta
acgcgacacgtgaggccatcgaaagaaagcagggctcgttga
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