Vibrio antiquarius: VEA_001524
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Entry
VEA_001524 CDS
T01107
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vex
Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vex03016
]
VEA_001524
Enzymes [BR:
vex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
VEA_001524
Transfer RNA biogenesis [BR:
vex03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
VEA_001524
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ACY54207
LinkDB
All DBs
Position
2:complement(1720072..1722075)
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AA seq
667 aa
AA seq
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MFQDNPLLAQLKQQIQENLPKKEGSIKATDKGFGFLEVDSKTSFFIPPAYMKKCMHGDKV
VAIIRTENEREVAEPQELLEQAVTRFIGRVKMFKGKLNVAPDHPQLKKLSLKAKLKKGLK
PDEFAEGDWVVAHLIRHPLKGDNSFFVEISEKITDANDKIAPWWVTLAQNDLPNSEPAGI
ENWELKDDADLERVDMTHVPFVTIDGESTKDMDDALYAKKTESGDFELTIAIADPTAYIT
PEDEMDKVARERGYTIYLPGRNIPMLPRDLADNLCSLIEGEIRPAICCTVTVNKDGVIGD
DIKFFAANIKSHARLAYDHVSDWLENGSSEAWQPSEEIATIVRDLYDFSLARAEWREKNA
VVFPDRPDYRFELSEDNDVVAIHADMRRSANRLVEESMITANICAGRTLRDKFETGVFNT
HAGIKTEKIEEVVQLVNPEGALEFTAESITTLEGFAALRRWLAAQETSYLDNRIRKFQAY
SEVGNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKAVILGKEPVQKPDDQVGEELAL
HRKHHKIAERNVSDWLYARTLADEPNKKTCFTGEIFDINRAGARVRLLENGAAAFIPGAL
ILDNKERIECNGDNGTISIDKEVVYKLGDTLEIVLADVNQENRSLVAKPTQVFAEQPAAQ
AEQTVSE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccactactcgctcagcttaagcagcaaatccaagaaaacctgccg
aaaaaagaaggctcaataaaagccacagataaaggctttggctttttggaagtggacagc
aagactagcttcttcatcccacctgcgtacatgaaaaagtgcatgcacggtgacaaagtc
gtcgccattatccgcacagaaaatgaacgcgaagttgcagagccacaagagctgttagaa
caagccgtgactcgctttattggtcgagtcaaaatgttcaaaggcaagctaaacgtagca
cctgatcacccacagcttaaaaagctttctcttaaagcgaaactaaagaaaggtctaaaa
cctgacgagttcgctgagggagattgggttgtcgcacatcttattcgccaccctctaaaa
ggcgataactctttcttcgtggaaatttctgaaaaaatcacagacgcgaacgacaaaatt
gcaccttggtgggtaacgcttgctcaaaacgatctaccaaactctgagccagcaggcatc
gagaactgggaactaaaagacgacgccgatctagaacgcgtagacatgacacacgttcct
ttcgtgactatcgatggtgaatcaaccaaagatatggacgatgcgctgtacgcgaagaaa
accgaatctggcgatttcgaactgactatcgctatcgcagatccaaccgcctacatcaca
ccagaagatgaaatggataaagtagcacgtgagcgtggctatactatttatcttccgggc
cgcaatattccaatgctgcctcgcgatctagcagacaacctatgctctctgattgaaggc
gaaatccgccctgctatttgctgtaccgtaaccgtaaataaagacggcgtaattggcgac
gatatcaagttctttgcagcaaacatcaaatcacacgcacgcctagcatacgatcacgtg
tctgattggctagaaaacggcagctcagaagcatggcaaccatctgaagagatcgcgacg
atcgttcgtgacctttacgacttttcccttgctcgcgcagaatggcgtgagaaaaacgca
gtggtcttcccagaccgccctgactaccgttttgagctgagtgaagacaacgatgtggtt
gctattcatgcagatatgcgccgcagtgcaaatcgcttggttgaagagtcaatgattacc
gcaaacatctgtgcaggtcgtacactgcgcgataaatttgaaacaggtgttttcaatact
cacgctggcattaagactgagaagattgaagaagtggttcaacttgtcaatccagaaggt
gcactggaattcacagcggagtcaattactactctagaaggctttgctgcattgcgtcgc
tggttggctgcgcaagaaacctcttacctagataatcgtattcgtaagttccaagcctac
agtgaggtaggtaatcagcctcttcctcattacgctatggggctggatatctatgcgact
tggacatcaccaattcgtaagtacggcgatatgatcaaccatcgcatgttgaaggccgtc
atcctaggcaaagagccagtgcaaaaacctgatgatcaagtcggtgaagaactagctctg
caccgtaaacatcataaaattgctgagcgaaatgtctcagattggttatatgcacgtacg
cttgctgatgagccgaacaagaaaacttgtttcacaggtgagattttcgatattaatcgt
gctggtgcacgtgtccgacttctcgaaaatggcgcagcagcctttattcctggtgcacta
attcttgataataaagaaagaattgagtgcaatggcgacaacggtaccatctctatcgat
aaagaggtcgtatacaaacttggtgatacattggaaattgtccttgcggacgtaaaccaa
gagaaccgcagtttagttgcaaagccaacccaggtatttgctgaacaaccagcagcacaa
gcagaacaaactgtaagtgaataa
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