Vibrio antiquarius: VEA_001988
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Entry
VEA_001988 CDS
T01107
Name
(GenBank) fatty oxidation complex alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vex
Vibrio antiquarius
Pathway
vex00071
Fatty acid degradation
vex00280
Valine, leucine and isoleucine degradation
vex00310
Lysine degradation
vex00362
Benzoate degradation
vex00380
Tryptophan metabolism
vex00410
beta-Alanine metabolism
vex00640
Propanoate metabolism
vex00650
Butanoate metabolism
vex00907
Pinene, camphor and geraniol degradation
vex00930
Caprolactam degradation
vex01100
Metabolic pathways
vex01110
Biosynthesis of secondary metabolites
vex01120
Microbial metabolism in diverse environments
vex01200
Carbon metabolism
vex01212
Fatty acid metabolism
Module
vex_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VEA_001988
00650 Butanoate metabolism
VEA_001988
09103 Lipid metabolism
00071 Fatty acid degradation
VEA_001988
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VEA_001988
00310 Lysine degradation
VEA_001988
00380 Tryptophan metabolism
VEA_001988
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VEA_001988
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VEA_001988
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VEA_001988
00930 Caprolactam degradation
VEA_001988
Enzymes [BR:
vex01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VEA_001988
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VEA_001988
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VEA_001988
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
VEA_001988
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Carboxyl_trans
NAD_binding_2
DUF5546
DAO
Motif
Other DBs
NCBI-ProteinID:
ACY50151
LinkDB
All DBs
Position
1:397572..399743
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAETLQVKEIQDGIAELSFCSPKSVNKLDLATLESLDKALDALIAHQGLKGLLLTSD
KDAFIVGADITEFLGLFAKTDAELDQWLQFANSIFNKLEDLPVPTISVIKGHALGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALK
IGLLDAVVETDALYESALQTLNSAINEKLDWQARRAQKTSPLTLSKLESMMSFTMAKGLV
AQKAGPHYPAPMTAVITIEEGARFARNEALDIERKHFVKLAKSEEAKSLVGLFLNDQYIK
GIAKKAAKSASKDTQRAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQASLDLGMTEASKL
LNKRLSRGRIDGFKMAGILASITPSLHYAGIENSDVIVEAVVENPKVKAAVLSEVESHVG
DDTVITSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKVMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAEGFPERMGKQGRDAIDALFEADKYGQKNGNGFYSYTIDKKGK
PKKTFSEAILPVLADVCADKHDFDDETIIQRMMIPMINEVVLCLQEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIAEYVEMAKQHAELGAMYQVPQMLIDMAAKGESFYGAQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgaaaccctacaggtaaaggaaatacaagatggtattgcagagcta
agcttctgctctccaaaatccgtcaacaaactcgacctagcgacattggaatcgctagat
aaagctcttgatgcgctcattgcccatcaaggcctcaaggggttgttgctcacttcagat
aaagacgcattcattgtaggcgcagacattaccgagtttttaggtctgtttgctaaaacg
gatgccgagctcgaccaatggctgcaatttgctaatagcatctttaacaaattagaagac
ttacccgttccgaccatctcagtgatcaaaggccacgctcttggtggcggttgtgaatgt
gtactagcaacagacatgcgtattggtgacaaaaccaccagcatcggcctaccagaaacg
aaactgggaatcatgccaggctttggtggttgtgtacgcttacctcgcgttattggcgca
gacagcgcaatggaaatcatcacccaaggtaaagcatgccgagctgatgaagcattgaaa
attggcttactcgatgctgttgtagagactgatgctttatacgaatcggcactacaaacg
ctgaactctgcaattaacgagaaacttgactggcaagcacgccgagcacagaaaacatct
ccgctaacgctgagtaagcttgaatcaatgatgagcttcaccatggcgaagggtctggtg
gcacaaaaagcaggtcctcattaccctgccccaatgacagccgttatcacgattgaagaa
ggtgctcgctttgcacgtaatgaagcgttagacattgaacgtaagcacttcgtgaaattg
gctaaatcggaagaagcaaaatcactggttggcctattccttaatgatcaatacatcaaa
ggcattgcgaaaaaagcagcgaagtcagcaagtaaagacacgcaacgtgcagccgtatta
ggtgcaggtatcatgggtggcggcattgcttaccaatcagcgctaaaaggtgtgccagtc
ttgatgaaagacatcgcacaagcgtcgctcgacctaggcatgactgaagcatctaagctg
ctgaataaacgcttatctcgcggtcgcattgacggctttaagatggcaggtattttagcg
tcaatcacaccgagcctacattacgcaggtattgaaaactctgatgtgattgttgaagct
gtcgttgaaaacccgaaagtaaaagcagcagttttgagtgaagttgagtcccatgtcggt
gacgacaccgttatcacctcaaacacctcgacgattcctatcaacctattggcaaaatca
ctaaaacgcccagaaaacttctgtggtatgcacttcttcaacccagtgcatcgtatgcct
cttgttgagatcatccgtggtgagcacacctctgatgaaaccatcaatcgtgttgtggcg
tatgctgcgaaaatgggcaaatcaccaattgtcgttaatgactgcccggggttcttcgtt
aaccgcgtattgttcccatactttggcggcttcagcatgctacttcgtgatggtgctgac
tttacgaaaatcgacaaagtcatggagcgtaagtttggctggccgatgggaccggcgtac
ttgcttgatgtagtcggcattgataccgcgcaccacgcacaagctgtgatggcagagggt
ttccctgagcgtatgggtaaacaaggtcgtgatgcgattgatgcactattcgaagcagac
aaatatggtcagaaaaatggtaatggcttctacagctacaccatagataaaaaaggtaag
ccgaagaaaaccttctcagaagcgatcttaccagtacttgccgacgtttgtgctgataag
catgactttgacgatgagaccatcattcaacgtatgatgattccaatgatcaacgaagtt
gtgctgtgccttcaagaaggcatcatcgctactccgcaggaagcagacatggcattggtt
tatggtcttggtttccctccattccgcggtggcgtattccgctatctagacagcgtgggt
attgctgaatacgttgaaatggcaaaacaacacgccgagctaggtgcgatgtaccaagta
ccgcaaatgctgattgatatggcggcgaaaggagaaagcttttacggtgcacaacagcaa
ggttctatctaa
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