Vibrio antiquarius: VEA_002072
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Entry
VEA_002072 CDS
T01107
Name
(GenBank) thiamin biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vex
Vibrio antiquarius
Pathway
vex00730
Thiamine metabolism
vex01100
Metabolic pathways
vex01240
Biosynthesis of cofactors
Module
vex_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VEA_002072
Enzymes [BR:
vex01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
VEA_002072
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
PepSY
Motif
Other DBs
NCBI-ProteinID:
ACY50235
UniProt:
A0ABM9WS47
LinkDB
All DBs
Position
1:484687..486627
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AA seq
646 aa
AA seq
DB search
MSSRKQARLEAKQFIETLSVQPYPNSTKVYVEGSRPDVRVPMREIALADSLIGGTKEAPI
FEPNEPVRVYDTSGVYTDPEHTIDLYNGLPKLRESWIEERGDTELLDEVSSVYTKERLED
ETLDDLRYGNLPRIRRAKDGQCVTQLHYARKGIITPEMEFIALRENMGRAKYRDDVLNQQ
HPGQSFGANLPKDITAEFVRKEVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSS
VTSSIEEEVEKLVWATRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAENLNWEVMRDTLIEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL
AHHQESFLYTHFREICEICAKYDVALSLGDGLRPGSVADANDEAQFAELRTLGELTKVAW
EYDVQVIIEGPGHVPMHMIKENMEEQLEHCHEAPFYTLGPLTTDVAPGYDHITSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKVGMITYKLAAHAADLAKGHPGAQVRDNALSKAR
FEFRWEDQFNLSLDPETARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKDT
EQVAADQAISIKMLDDPLEGMRQKSQEFRESGSELYHPAAHAEVSD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcgcaaacaagcgagactggaagcaaaacagttcattgaaacactctcggta
cagccgtacccaaattccacaaaagtatatgtagaaggttcacgtccagatgttcgtgta
cctatgcgtgaaatagcgctagcagatagcctgattggtggcacaaaagaagcgccaatc
ttcgagcctaatgagccagtacgcgtttacgatacctctggagtatacactgacccagaa
cacaccatagatctttataacggcttacctaagttaagagaaagctggattgaagagcgc
ggtgacacagagttactcgatgaagtaagctcggtgtacaccaaagaacgcttagaagac
gaaacactagacgatcttcgttacggtaatctaccacgtattcgacgtgccaaagatggg
cagtgcgtcactcagctgcactatgctcgcaaaggcattattaccccagaaatggaattc
atcgcgctgcgtgaaaacatgggtcgtgccaagtaccgtgatgatgtactgaatcaacag
catcctggtcaaagctttggagcgaatcttccaaaagacattaccgccgagtttgttcgc
aaagaagttgccgaaggtcgcgctattatcccttctaatatcaaccacccagaatccgaa
ccaatgatcattggacgtaactttttggtcaaagtaaacgccaatattggtaactcatcg
gtgacgtcttcgattgaggaagaggttgagaagctagtgtgggcgacacgctggggtggc
gatactgttatggatctctccacaggtcgcaatattcatgaaactcgagaatggattctg
cgtaacagcccggttccgatcggtaccgtacctatgtaccaagcgcttgagaaagtgaat
ggtgttgcggaaaaccttaactgggaagtgatgcgcgatactctgattgagcaagcagag
cagggtgttgattacttcactatccatgctggcttactactgcgctatgtaccaatgaca
gcaaaacgcgttaccggcatcgtctctcgtggtggttctatcatcgcgaaatggtgttta
gcacatcaccaagaaagcttcttatatacccacttccgagagatctgtgaaatctgtgcc
aagtatgatgttgcactttctctcggtgatggtctgcgccctggttcggttgccgatgct
aacgatgaagcgcaatttgcggagcttcgtacccttggcgagttgactaaggttgcgtgg
gaatacgacgtacaggtcattatcgaaggtcctggccatgttccaatgcacatgatcaaa
gagaacatggaagagcagctagagcactgccatgaagctccgttctacacccttggtcca
ctgacgacagacgtcgctcctggttacgaccatattacgtcaggtattggcgctgccatg
attggctggtatggctgtgcgatgctttgttacgtaacacctaaagagcatcttggctta
ccaaacaaagaagacgtgaaggtaggcatgatcacttacaagcttgctgctcacgctgct
gatttggcgaaagggcaccctggcgcacaagttcgtgataacgcgctttctaaagcacgt
tttgaattccgctgggaagaccaattcaacttgtcactcgacccagaaaccgctcgcgct
ttccatgatgaaaccttgcctcaagagtctggaaaagttgctcacttttgttcgatgtgt
ggaccaaagttctgctcgatgaagatttcgcaagaggtacgagagtacgcgaaagacact
gagcaagttgccgcggaccaagctatctcgatcaaaatgcttgatgatcctcttgagggg
atgcgtcagaaatcgcaagaatttagagagtcaggttctgagttataccacccagcagca
catgccgaggtaagtgattaa
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